Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 ESPNP-201ENST00000270691 2015 ntBASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 MIR662-201ENST00000384847 95 ntBASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 AC024563.2-201ENST00000603282 481 ntBASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB9Q9Y5E1 LINC01126-201ENST00000623515 1646 ntBASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 AP002383.4-201ENST00000442518 975 ntBASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 AC009078.2-202ENST00000463353 338 ntBASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHB9Q9Y5E1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 AL162741.1-201ENST00000565563 1558 ntBASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 AP000867.3-201ENST00000524675 377 ntBASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 AL031008.1-201ENST00000619963 541 ntBASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB9Q9Y5E1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms