Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 Z85996.1-201ENST00000494644 937 ntBASIC17.18■□□□□ 0.34
AP4S1Q9Y587 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 AC091874.3-201ENST00000512672 1195 ntBASIC17.17■□□□□ 0.34
AP4S1Q9Y587 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.17■□□□□ 0.34
AP4S1Q9Y587 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4S1Q9Y587 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 AL138688.1-201ENST00000624851 1594 ntBASIC17.16■□□□□ 0.34
AP4S1Q9Y587 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 MIPEPP3-201ENST00000412105 444 ntBASIC17.16■□□□□ 0.34
AP4S1Q9Y587 AC004911.1-201ENST00000416316 871 ntBASIC17.16■□□□□ 0.34
AP4S1Q9Y587 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.16■□□□□ 0.34
AP4S1Q9Y587 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 PNMA6B-201ENST00000538162 1200 ntBASIC17.16■□□□□ 0.34
AP4S1Q9Y587 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.16■□□□□ 0.34
AP4S1Q9Y587 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms