Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 AL512625.2-201ENST00000417533 625 ntBASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 AL138688.1-201ENST00000624851 1594 ntBASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRCH1Q9Y2L9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 GUSBP6-202ENST00000438529 1198 ntBASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 AC142086.2-201ENST00000569753 217 ntBASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 AL096828.2-201ENST00000567259 1965 ntBASIC17.27■□□□□ 0.36
LRCH1Q9Y2L9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 AC092850.2-201ENST00000623821 2697 ntBASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
LRCH1Q9Y2L9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 PCDHB17P-201ENST00000539533 2393 ntBASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LRCH1Q9Y2L9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRCH1Q9Y2L9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.25■□□□□ 0.35
LRCH1Q9Y2L9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.25■□□□□ 0.35
LRCH1Q9Y2L9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH1Q9Y2L9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH1Q9Y2L9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH1Q9Y2L9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH1Q9Y2L9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LRCH1Q9Y2L9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LRCH1Q9Y2L9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH1Q9Y2L9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCH1Q9Y2L9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms