Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF6Q9Y252 TSPY21P-201ENST00000433481 731 ntBASIC17.12■□□□□ 0.33
RNF6Q9Y252 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF6Q9Y252 AL023803.3-201ENST00000615559 522 ntBASIC17.12■□□□□ 0.33
RNF6Q9Y252 MYC-208ENST00000641036 567 ntBASIC17.12■□□□□ 0.33
RNF6Q9Y252 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 AC009053.2-201ENST00000563701 2365 ntBASIC17.12■□□□□ 0.33
RNF6Q9Y252 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RNF6Q9Y252 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF6Q9Y252 HEIH-201ENST00000623091 1652 ntBASIC17.12■□□□□ 0.33
RNF6Q9Y252 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RNF6Q9Y252 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF6Q9Y252 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF6Q9Y252 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF6Q9Y252 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RNF6Q9Y252 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF6Q9Y252 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF6Q9Y252 AL031133.1-201ENST00000406807 723 ntBASIC17.11■□□□□ 0.33
RNF6Q9Y252 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF6Q9Y252 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.11■□□□□ 0.33
RNF6Q9Y252 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF6Q9Y252 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF6Q9Y252 AL353719.1-201ENST00000566847 864 ntBASIC17.11■□□□□ 0.33
RNF6Q9Y252 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF6Q9Y252 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF6Q9Y252 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF6Q9Y252 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF6Q9Y252 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF6Q9Y252 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF6Q9Y252 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF6Q9Y252 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 AC011558.1-201ENST00000623459 338 ntBASIC17.1■□□□□ 0.33
RNF6Q9Y252 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF6Q9Y252 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF6Q9Y252 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF6Q9Y252 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.09■□□□□ 0.33
RNF6Q9Y252 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF6Q9Y252 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
RNF6Q9Y252 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms