Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 KRT18P31-201ENST00000506277 1292 ntBASIC19.49■□□□□ 0.71
CNTN3Q9P232 UNC93B7-201ENST00000509439 705 ntBASIC19.49■□□□□ 0.71
CNTN3Q9P232 AC111152.3-201ENST00000569699 673 ntBASIC19.49■□□□□ 0.71
CNTN3Q9P232 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.49■□□□□ 0.71
CNTN3Q9P232 AL121894.2-201ENST00000602977 491 ntBASIC19.49■□□□□ 0.71
CNTN3Q9P232 AC138894.3-201ENST00000603787 634 ntBASIC19.49■□□□□ 0.71
CNTN3Q9P232 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.49■□□□□ 0.71
CNTN3Q9P232 AL691432.3-201ENST00000621860 400 ntBASIC19.49■□□□□ 0.71
CNTN3Q9P232 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.49■□□□□ 0.71
CNTN3Q9P232 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.49■□□□□ 0.71
CNTN3Q9P232 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTN3Q9P232 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTN3Q9P232 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNTN3Q9P232 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNTN3Q9P232 AC120498.9-201ENST00000339021 3867 ntBASIC19.49■□□□□ 0.71
CNTN3Q9P232 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.48■□□□□ 0.71
CNTN3Q9P232 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.48■□□□□ 0.71
CNTN3Q9P232 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.48■□□□□ 0.71
CNTN3Q9P232 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.48■□□□□ 0.71
CNTN3Q9P232 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CNTN3Q9P232 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.48■□□□□ 0.71
CNTN3Q9P232 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.48■□□□□ 0.71
CNTN3Q9P232 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.48■□□□□ 0.71
CNTN3Q9P232 BNIP3P18-201ENST00000593976 575 ntBASIC19.48■□□□□ 0.71
CNTN3Q9P232 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CNTN3Q9P232 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.48■□□□□ 0.71
CNTN3Q9P232 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNTN3Q9P232 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.48■□□□□ 0.71
CNTN3Q9P232 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNTN3Q9P232 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTN3Q9P232 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTN3Q9P232 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTN3Q9P232 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTN3Q9P232 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTN3Q9P232 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 MINOS1P3-201ENST00000457048 203 ntBASIC19.47■□□□□ 0.71
CNTN3Q9P232 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 AC091304.2-201ENST00000564639 760 ntBASIC19.47■□□□□ 0.71
CNTN3Q9P232 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTN3Q9P232 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTN3Q9P232 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTN3Q9P232 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTN3Q9P232 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNTN3Q9P232 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CNTN3Q9P232 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNTN3Q9P232 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 AC093677.2-201ENST00000600169 1863 ntBASIC19.46■□□□□ 0.71
CNTN3Q9P232 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.46■□□□□ 0.71
CNTN3Q9P232 AC112698.1-201ENST00000510299 916 ntBASIC19.46■□□□□ 0.71
CNTN3Q9P232 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.46■□□□□ 0.71
CNTN3Q9P232 IFNL4P1-201ENST00000607083 540 ntBASIC19.46■□□□□ 0.71
CNTN3Q9P232 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.46■□□□□ 0.71
CNTN3Q9P232 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNTN3Q9P232 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.46■□□□□ 0.71
CNTN3Q9P232 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.46■□□□□ 0.71
CNTN3Q9P232 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CNTN3Q9P232 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms