Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TLR9Q9NR96 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TLR9Q9NR96 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TLR9Q9NR96 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.2■□□□□ 0.66
TLR9Q9NR96 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TLR9Q9NR96 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TLR9Q9NR96 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TLR9Q9NR96 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TLR9Q9NR96 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TLR9Q9NR96 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 AC012640.2-201ENST00000561606 901 ntBASIC19.19■□□□□ 0.66
TLR9Q9NR96 AC025062.2-201ENST00000605477 670 ntBASIC19.19■□□□□ 0.66
TLR9Q9NR96 Z83851.2-201ENST00000609564 659 ntBASIC19.19■□□□□ 0.66
TLR9Q9NR96 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TLR9Q9NR96 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TLR9Q9NR96 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TLR9Q9NR96 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TLR9Q9NR96 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TLR9Q9NR96 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.19■□□□□ 0.66
TLR9Q9NR96 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TLR9Q9NR96 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TLR9Q9NR96 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TLR9Q9NR96 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TLR9Q9NR96 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.18■□□□□ 0.66
TLR9Q9NR96 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TLR9Q9NR96 KRT18P65-201ENST00000439811 1286 ntBASIC19.18■□□□□ 0.66
TLR9Q9NR96 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.18■□□□□ 0.66
TLR9Q9NR96 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
TLR9Q9NR96 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.18■□□□□ 0.66
TLR9Q9NR96 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
TLR9Q9NR96 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.18■□□□□ 0.66
TLR9Q9NR96 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
TLR9Q9NR96 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.18■□□□□ 0.66
TLR9Q9NR96 AC098818.2-201ENST00000564925 2320 ntBASIC19.18■□□□□ 0.66
TLR9Q9NR96 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TLR9Q9NR96 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TLR9Q9NR96 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 AL161938.1-201ENST00000569833 2180 ntBASIC19.17■□□□□ 0.66
TLR9Q9NR96 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TLR9Q9NR96 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TLR9Q9NR96 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TLR9Q9NR96 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TLR9Q9NR96 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TLR9Q9NR96 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TLR9Q9NR96 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TLR9Q9NR96 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TLR9Q9NR96 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TLR9Q9NR96 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 UPF3AP3-201ENST00000420996 769 ntBASIC19.17■□□□□ 0.66
TLR9Q9NR96 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 RNA5SP415-201ENST00000517246 115 ntBASIC19.17■□□□□ 0.66
TLR9Q9NR96 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 AC055717.3-201ENST00000622967 595 ntBASIC19.17■□□□□ 0.66
TLR9Q9NR96 AC008735.5-201ENST00000623544 497 ntBASIC19.17■□□□□ 0.66
TLR9Q9NR96 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TLR9Q9NR96 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms