Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ARHGEF3Q9NR81 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.18■□□□□ 0.66
ARHGEF3Q9NR81 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF3Q9NR81 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.18■□□□□ 0.66
ARHGEF3Q9NR81 HLA-A-201ENST00000376802 1334 ntBASIC19.18■□□□□ 0.66
ARHGEF3Q9NR81 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
ARHGEF3Q9NR81 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.18■□□□□ 0.66
ARHGEF3Q9NR81 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 LINC00167-201ENST00000530583 1419 ntBASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 AC099336.1-202ENST00000602961 463 ntBASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 AL671883.3-201ENST00000603274 991 ntBASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 IGHV3-41-201ENST00000613121 348 ntBASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 AC117500.6-201ENST00000624871 588 ntBASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF3Q9NR81 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 AL590627.1-203ENST00000421194 1026 ntBASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 TSPY12P-201ENST00000421279 868 ntBASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 AC005332.3-201ENST00000589904 676 ntBASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 Z69720.1-201ENST00000601483 472 ntBASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 AC139530.3-201ENST00000620344 690 ntBASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 KRT8P3-201ENST00000519669 1449 ntBASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF3Q9NR81 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 AL031598.1-201ENST00000561511 1773 ntBASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ARHGEF3Q9NR81 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms