Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 AC093010.1-201ENST00000473625 1624 ntBASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 EGLN1P1-201ENST00000531623 762 ntBASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 AC010653.2-201ENST00000623505 997 ntBASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 AL024508.2-201ENST00000607749 1894 ntBASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 AC010947.1-201ENST00000623454 693 ntBASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NLRC4Q9NPP4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 AC010240.3-201ENST00000607688 395 ntBASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NLRC4Q9NPP4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.67■□□□□ 0.74
NLRC4Q9NPP4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms