Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 AC145285.6-201ENST00000604632 637 ntBASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 AC092865.7-201ENST00000641832 219 ntBASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC38A1Q9H2H9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC38A1Q9H2H9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 KRT18P55-202ENST00000578578 1546 ntBASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 AP000523.1-201ENST00000398242 1049 ntBASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 AL138966.2-201ENST00000621997 464 ntBASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 AL157888.1-201ENST00000631930 593 ntBASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 AC141257.4-201ENST00000634557 245 ntBASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 AC136944.6-201ENST00000634818 245 ntBASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 LINC00896-202ENST00000609602 2128 ntBASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A1Q9H2H9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A1Q9H2H9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms