Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 MIR149-201ENST00000384879 89 ntBASIC18.26■□□□□ 0.51
CLPBQ9H078 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.26■□□□□ 0.51
CLPBQ9H078 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.26■□□□□ 0.51
CLPBQ9H078 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.26■□□□□ 0.51
CLPBQ9H078 CLEC4GP1-201ENST00000596555 870 ntBASIC18.26■□□□□ 0.51
CLPBQ9H078 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.26■□□□□ 0.51
CLPBQ9H078 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CLPBQ9H078 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CLPBQ9H078 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.26■□□□□ 0.51
CLPBQ9H078 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.26■□□□□ 0.51
CLPBQ9H078 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 AC009102.3-201ENST00000623118 1491 ntBASIC18.26■□□□□ 0.51
CLPBQ9H078 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPBQ9H078 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CLPBQ9H078 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLPBQ9H078 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLPBQ9H078 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.25■□□□□ 0.51
CLPBQ9H078 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPBQ9H078 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLPBQ9H078 AL391807.1-203ENST00000604392 2365 ntBASIC18.25■□□□□ 0.51
CLPBQ9H078 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPBQ9H078 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.25■□□□□ 0.51
CLPBQ9H078 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPBQ9H078 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLPBQ9H078 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLPBQ9H078 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPBQ9H078 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLPBQ9H078 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CLPBQ9H078 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
CLPBQ9H078 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.25■□□□□ 0.51
CLPBQ9H078 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLPBQ9H078 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLPBQ9H078 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.25■□□□□ 0.51
CLPBQ9H078 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.25■□□□□ 0.51
CLPBQ9H078 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.25■□□□□ 0.51
CLPBQ9H078 MIR3180-4-201ENST00000582223 153 ntBASIC18.25■□□□□ 0.51
CLPBQ9H078 AC011498.5-201ENST00000592027 486 ntBASIC18.25■□□□□ 0.51
CLPBQ9H078 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLPBQ9H078 AL121894.2-201ENST00000602977 491 ntBASIC18.25■□□□□ 0.51
CLPBQ9H078 AL136038.4-201ENST00000603606 1261 ntBASIC18.25■□□□□ 0.51
CLPBQ9H078 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLPBQ9H078 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.25■□□□□ 0.51
CLPBQ9H078 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPBQ9H078 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.25■□□□□ 0.51
CLPBQ9H078 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPBQ9H078 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPBQ9H078 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPBQ9H078 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.25■□□□□ 0.51
CLPBQ9H078 AL162741.1-201ENST00000565563 1558 ntBASIC18.25■□□□□ 0.51
CLPBQ9H078 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPBQ9H078 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPBQ9H078 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CLPBQ9H078 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPBQ9H078 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPBQ9H078 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPBQ9H078 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPBQ9H078 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.24■□□□□ 0.51
CLPBQ9H078 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPBQ9H078 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPBQ9H078 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPBQ9H078 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.24■□□□□ 0.51
CLPBQ9H078 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPBQ9H078 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPBQ9H078 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPBQ9H078 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPBQ9H078 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.24■□□□□ 0.51
CLPBQ9H078 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPBQ9H078 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPBQ9H078 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.24■□□□□ 0.51
CLPBQ9H078 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.24■□□□□ 0.51
CLPBQ9H078 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.24■□□□□ 0.51
CLPBQ9H078 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPBQ9H078 AC092119.3-201ENST00000612618 583 ntBASIC18.24■□□□□ 0.51
CLPBQ9H078 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.24■□□□□ 0.51
CLPBQ9H078 AC135050.7-201ENST00000624508 2218 ntBASIC18.24■□□□□ 0.51
CLPBQ9H078 AC016734.2-201ENST00000624325 1377 ntBASIC18.24■□□□□ 0.51
CLPBQ9H078 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPBQ9H078 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPBQ9H078 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPBQ9H078 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPBQ9H078 BICD1-207ENST00000551848 1962 ntBASIC18.24■□□□□ 0.51
CLPBQ9H078 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CLPBQ9H078 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CLPBQ9H078 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLPBQ9H078 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLPBQ9H078 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CLPBQ9H078 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLPBQ9H078 AC099343.3-201ENST00000605834 2503 ntBASIC18.23■□□□□ 0.51
CLPBQ9H078 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPBQ9H078 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.23■□□□□ 0.51
CLPBQ9H078 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPBQ9H078 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.23■□□□□ 0.51
CLPBQ9H078 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms