Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 AC006011.2-201ENST00000621313 1158 ntBASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 AC006116.8-202ENST00000587620 1550 ntBASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 HTR7P1-202ENST00000624664 4411 ntBASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 AL023284.2-201ENST00000405850 579 ntBASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 MCCD1P1-208ENST00000445732 328 ntBASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 AC008622.2-201ENST00000617006 1229 ntBASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXP3Q9BZS1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 AC128688.1-201ENST00000487626 519 ntBASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 KRT18P55-202ENST00000578578 1546 ntBASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
FOXP3Q9BZS1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 AP000692.2-201ENST00000608391 879 ntBASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 FAM87A-204ENST00000613235 858 ntBASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
FOXP3Q9BZS1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms