Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SSBP4Q9BWG4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.74□□□□□ -0.21
SSBP4Q9BWG4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SSBP4Q9BWG4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 PNMA6B-201ENST00000538162 1200 ntBASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SSBP4Q9BWG4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 CDCA4P2-201ENST00000441182 718 ntBASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 AC060766.5-201ENST00000590539 871 ntBASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 HLA-A-209ENST00000638375 975 ntBASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 FLJ13224-201ENST00000313737 1514 ntBASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 AC112777.1-201ENST00000540175 1423 ntBASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 AL023806.1-201ENST00000603994 1649 ntBASIC13.72□□□□□ -0.21
SSBP4Q9BWG4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms