Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 AP001412.1-201ENST00000608405 714 ntBASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 AL023875.1-201ENST00000640777 796 ntBASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 AC008741.2-201ENST00000612792 3115 ntBASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
NDUFAF3Q9BU61 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 AL596275.1-201ENST00000423464 877 ntBASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 AL135905.2-201ENST00000584934 1404 ntBASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NDUFAF3Q9BU61 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms