Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 UBE2SP1-201ENST00000450587 669 ntBASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 AP003041.3-201ENST00000527151 707 ntBASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 AC142381.4-202ENST00000563973 229 ntBASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 MIR3180-4-201ENST00000582223 153 ntBASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 AC233702.5-201ENST00000584107 538 ntBASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 AL023803.3-201ENST00000615559 522 ntBASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 CR769767.2-201ENST00000622735 460 ntBASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 LINC01126-201ENST00000623515 1646 ntBASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SHANK2-AS3Q9BTD1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 AL353719.1-201ENST00000566847 864 ntBASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 AC026471.5-201ENST00000615068 467 ntBASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SHANK2-AS3Q9BTD1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 PRORSD1P-201ENST00000295112 541 ntBASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 AC104390.1-201ENST00000555663 520 ntBASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 AC112497.1-201ENST00000624824 639 ntBASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHANK2-AS3Q9BTD1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms