Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.68■□□□□ 0.42
PKP4Q99569 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PKP4Q99569 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 AL671277.2-201ENST00000458060 996 ntBASIC17.68■□□□□ 0.42
PKP4Q99569 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.68■□□□□ 0.42
PKP4Q99569 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.68■□□□□ 0.42
PKP4Q99569 VENTXP5-201ENST00000523979 775 ntBASIC17.68■□□□□ 0.42
PKP4Q99569 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.68■□□□□ 0.42
PKP4Q99569 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.68■□□□□ 0.42
PKP4Q99569 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PKP4Q99569 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.68■□□□□ 0.42
PKP4Q99569 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PKP4Q99569 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PKP4Q99569 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.67■□□□□ 0.42
PKP4Q99569 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.67■□□□□ 0.42
PKP4Q99569 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.67■□□□□ 0.42
PKP4Q99569 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.67■□□□□ 0.42
PKP4Q99569 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.67■□□□□ 0.42
PKP4Q99569 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.67■□□□□ 0.42
PKP4Q99569 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.67■□□□□ 0.42
PKP4Q99569 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.67■□□□□ 0.42
PKP4Q99569 NTF6B-201ENST00000591913 560 ntBASIC17.67■□□□□ 0.42
PKP4Q99569 AC008687.5-201ENST00000593746 558 ntBASIC17.67■□□□□ 0.42
PKP4Q99569 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
PKP4Q99569 AC083849.1-201ENST00000615227 514 ntBASIC17.67■□□□□ 0.42
PKP4Q99569 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.67■□□□□ 0.42
PKP4Q99569 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
PKP4Q99569 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PKP4Q99569 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.67■□□□□ 0.42
PKP4Q99569 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PKP4Q99569 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.66■□□□□ 0.42
PKP4Q99569 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PKP4Q99569 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.66■□□□□ 0.42
PKP4Q99569 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.66■□□□□ 0.42
PKP4Q99569 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.66■□□□□ 0.42
PKP4Q99569 MIR662-201ENST00000384847 95 ntBASIC17.66■□□□□ 0.42
PKP4Q99569 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.66■□□□□ 0.42
PKP4Q99569 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PKP4Q99569 KRT18P48-201ENST00000434763 852 ntBASIC17.66■□□□□ 0.42
PKP4Q99569 SPDYE13P-201ENST00000445314 798 ntBASIC17.66■□□□□ 0.42
PKP4Q99569 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.66■□□□□ 0.42
PKP4Q99569 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.66■□□□□ 0.42
PKP4Q99569 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PKP4Q99569 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.66■□□□□ 0.42
PKP4Q99569 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PKP4Q99569 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.66■□□□□ 0.42
PKP4Q99569 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PKP4Q99569 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.66■□□□□ 0.42
PKP4Q99569 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PKP4Q99569 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PKP4Q99569 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.66■□□□□ 0.42
PKP4Q99569 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.65■□□□□ 0.42
PKP4Q99569 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms