Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SPENQ96T58 AC023274.1-201ENST00000418278 595 ntBASIC16.29■□□□□ 0.2
SPENQ96T58 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.29■□□□□ 0.2
SPENQ96T58 AC027612.4-201ENST00000605371 583 ntBASIC16.29■□□□□ 0.2
SPENQ96T58 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
SPENQ96T58 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.29■□□□□ 0.2
SPENQ96T58 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.29■□□□□ 0.2
SPENQ96T58 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SPENQ96T58 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.29■□□□□ 0.2
SPENQ96T58 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
SPENQ96T58 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPENQ96T58 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPENQ96T58 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPENQ96T58 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SPENQ96T58 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.29■□□□□ 0.2
SPENQ96T58 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPENQ96T58 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.29■□□□□ 0.2
SPENQ96T58 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPENQ96T58 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPENQ96T58 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPENQ96T58 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPENQ96T58 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPENQ96T58 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPENQ96T58 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.29■□□□□ 0.2
SPENQ96T58 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.29■□□□□ 0.2
SPENQ96T58 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPENQ96T58 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPENQ96T58 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.28■□□□□ 0.2
SPENQ96T58 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.28■□□□□ 0.2
SPENQ96T58 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPENQ96T58 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SPENQ96T58 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.28■□□□□ 0.2
SPENQ96T58 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPENQ96T58 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.28■□□□□ 0.2
SPENQ96T58 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPENQ96T58 RPS8P6-201ENST00000426177 609 ntBASIC16.28■□□□□ 0.2
SPENQ96T58 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPENQ96T58 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.28■□□□□ 0.2
SPENQ96T58 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.28■□□□□ 0.2
SPENQ96T58 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.28■□□□□ 0.2
SPENQ96T58 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.28■□□□□ 0.2
SPENQ96T58 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPENQ96T58 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SPENQ96T58 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPENQ96T58 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPENQ96T58 AC116562.4-201ENST00000641316 2276 ntBASIC16.28■□□□□ 0.2
SPENQ96T58 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPENQ96T58 AP002414.3-201ENST00000589352 1468 ntBASIC16.28■□□□□ 0.2
SPENQ96T58 AC009102.3-201ENST00000623118 1491 ntBASIC16.28■□□□□ 0.2
SPENQ96T58 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SPENQ96T58 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SPENQ96T58 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.27■□□□□ 0.2
SPENQ96T58 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.27■□□□□ 0.2
SPENQ96T58 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPENQ96T58 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPENQ96T58 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPENQ96T58 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.27■□□□□ 0.2
SPENQ96T58 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPENQ96T58 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.27■□□□□ 0.2
SPENQ96T58 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.27■□□□□ 0.2
SPENQ96T58 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPENQ96T58 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.27■□□□□ 0.2
SPENQ96T58 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.27■□□□□ 0.2
SPENQ96T58 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPENQ96T58 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.27■□□□□ 0.2
SPENQ96T58 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.27■□□□□ 0.2
SPENQ96T58 AL513190.1-201ENST00000621254 727 ntBASIC16.27■□□□□ 0.2
SPENQ96T58 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.27■□□□□ 0.2
SPENQ96T58 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPENQ96T58 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SPENQ96T58 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPENQ96T58 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SPENQ96T58 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.27■□□□□ 0.2
SPENQ96T58 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.27■□□□□ 0.2
SPENQ96T58 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPENQ96T58 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPENQ96T58 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.27■□□□□ 0.19
SPENQ96T58 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPENQ96T58 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPENQ96T58 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SPENQ96T58 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.27■□□□□ 0.19
SPENQ96T58 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.27■□□□□ 0.19
SPENQ96T58 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SPENQ96T58 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPENQ96T58 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.27■□□□□ 0.19
SPENQ96T58 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.27■□□□□ 0.19
SPENQ96T58 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.27■□□□□ 0.19
SPENQ96T58 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.27■□□□□ 0.19
SPENQ96T58 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.27■□□□□ 0.19
SPENQ96T58 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.27■□□□□ 0.19
SPENQ96T58 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.27■□□□□ 0.19
SPENQ96T58 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SPENQ96T58 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SPENQ96T58 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
SPENQ96T58 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPENQ96T58 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SPENQ96T58 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPENQ96T58 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.26■□□□□ 0.19
SPENQ96T58 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.26■□□□□ 0.19
SPENQ96T58 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms