Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 AL445675.2-201ENST00000620291 557 ntBASIC14.74□□□□□ -0.05
RAB40CQ96S21 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB40CQ96S21 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB40CQ96S21 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB40CQ96S21 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB40CQ96S21 AP001094.4-201ENST00000579008 2176 ntBASIC14.73□□□□□ -0.05
RAB40CQ96S21 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RAB40CQ96S21 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RAB40CQ96S21 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB40CQ96S21 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB40CQ96S21 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RAB40CQ96S21 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RAB40CQ96S21 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40CQ96S21 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 LINC00602-201ENST00000629776 2065 ntBASIC14.72□□□□□ -0.05
RAB40CQ96S21 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 MIR564-202ENST00000385049 94 ntBASIC14.72□□□□□ -0.05
RAB40CQ96S21 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 RNA5SP413-201ENST00000516373 109 ntBASIC14.72□□□□□ -0.05
RAB40CQ96S21 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB40CQ96S21 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40CQ96S21 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RAB40CQ96S21 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB40CQ96S21 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40CQ96S21 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40CQ96S21 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40CQ96S21 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40CQ96S21 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40CQ96S21 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40CQ96S21 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms