Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.42□□□□□ -0.26
ODF3Q96PU9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.42□□□□□ -0.26
ODF3Q96PU9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.42□□□□□ -0.26
ODF3Q96PU9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
ODF3Q96PU9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.42□□□□□ -0.26
ODF3Q96PU9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.42□□□□□ -0.26
ODF3Q96PU9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ODF3Q96PU9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ODF3Q96PU9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ODF3Q96PU9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.42□□□□□ -0.26
ODF3Q96PU9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
ODF3Q96PU9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ODF3Q96PU9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ODF3Q96PU9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ODF3Q96PU9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ODF3Q96PU9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ODF3Q96PU9 CYP2D8P-201ENST00000433633 1490 ntBASIC13.42□□□□□ -0.26
ODF3Q96PU9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ODF3Q96PU9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ODF3Q96PU9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 AC006116.8-202ENST00000587620 1550 ntBASIC13.41□□□□□ -0.26
ODF3Q96PU9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 PCDHB18P-201ENST00000524813 2368 ntBASIC13.41□□□□□ -0.26
ODF3Q96PU9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 ECEL1P3-201ENST00000427961 737 ntBASIC13.41□□□□□ -0.26
ODF3Q96PU9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 AC113404.2-201ENST00000507884 177 ntBASIC13.41□□□□□ -0.26
ODF3Q96PU9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 AC024243.1-201ENST00000609234 778 ntBASIC13.41□□□□□ -0.26
ODF3Q96PU9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
ODF3Q96PU9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ODF3Q96PU9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.4□□□□□ -0.26
ODF3Q96PU9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.4□□□□□ -0.26
ODF3Q96PU9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ODF3Q96PU9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.4□□□□□ -0.26
ODF3Q96PU9 AC034232.1-201ENST00000506026 1064 ntBASIC13.4□□□□□ -0.26
ODF3Q96PU9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.4□□□□□ -0.26
ODF3Q96PU9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.4□□□□□ -0.26
ODF3Q96PU9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ODF3Q96PU9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ODF3Q96PU9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ODF3Q96PU9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ODF3Q96PU9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.4□□□□□ -0.26
ODF3Q96PU9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ODF3Q96PU9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ODF3Q96PU9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
ODF3Q96PU9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms