Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 KRT16P4-201ENST00000453883 522 ntBASIC14.76□□□□□ -0.05
ZNF48Q96MX3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 AP002469.2-201ENST00000531724 424 ntBASIC14.76□□□□□ -0.05
ZNF48Q96MX3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 AL353801.3-201ENST00000609898 542 ntBASIC14.76□□□□□ -0.05
ZNF48Q96MX3 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.76□□□□□ -0.05
ZNF48Q96MX3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 HCG11-201ENST00000411553 5696 ntBASIC14.76□□□□□ -0.05
ZNF48Q96MX3 KRT89P-201ENST00000620027 1478 ntBASIC14.76□□□□□ -0.05
ZNF48Q96MX3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF48Q96MX3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 AC106820.2-201ENST00000563775 3264 ntBASIC14.75□□□□□ -0.05
ZNF48Q96MX3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 AKR1C7P-201ENST00000305623 895 ntBASIC14.75□□□□□ -0.05
ZNF48Q96MX3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 KRT18P41-201ENST00000518924 1277 ntBASIC14.75□□□□□ -0.05
ZNF48Q96MX3 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 AC004263.2-201ENST00000617183 678 ntBASIC14.75□□□□□ -0.05
ZNF48Q96MX3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 AL163051.1-201ENST00000569214 1512 ntBASIC14.75□□□□□ -0.05
ZNF48Q96MX3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF48Q96MX3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms