Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.81■■□□□ 1.4
NBPF4Q96M43 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NBPF4Q96M43 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC23.81■■□□□ 1.4
NBPF4Q96M43 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.81■■□□□ 1.4
NBPF4Q96M43 HLA-J-201ENST00000462773 1622 ntBASIC23.81■■□□□ 1.4
NBPF4Q96M43 ESPNP-201ENST00000270691 2015 ntBASIC23.81■■□□□ 1.4
NBPF4Q96M43 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NBPF4Q96M43 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NBPF4Q96M43 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NBPF4Q96M43 BX842568.4-201ENST00000421222 227 ntBASIC23.81■■□□□ 1.4
NBPF4Q96M43 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.81■■□□□ 1.4
NBPF4Q96M43 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC23.81■■□□□ 1.4
NBPF4Q96M43 MTDHP4-201ENST00000600287 670 ntBASIC23.81■■□□□ 1.4
NBPF4Q96M43 AL139288.1-201ENST00000623748 933 ntBASIC23.81■■□□□ 1.4
NBPF4Q96M43 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NBPF4Q96M43 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC23.81■■□□□ 1.4
NBPF4Q96M43 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NBPF4Q96M43 GMCL1P1-201ENST00000463439 1581 ntBASIC23.81■■□□□ 1.4
NBPF4Q96M43 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NBPF4Q96M43 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
NBPF4Q96M43 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.8■■□□□ 1.4
NBPF4Q96M43 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF4Q96M43 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF4Q96M43 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
NBPF4Q96M43 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC23.8■■□□□ 1.4
NBPF4Q96M43 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF4Q96M43 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC23.8■■□□□ 1.4
NBPF4Q96M43 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC23.8■■□□□ 1.4
NBPF4Q96M43 RNA5SP415-201ENST00000517246 115 ntBASIC23.8■■□□□ 1.4
NBPF4Q96M43 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC23.8■■□□□ 1.4
NBPF4Q96M43 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF4Q96M43 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.8■■□□□ 1.4
NBPF4Q96M43 AC140113.2-201ENST00000604370 208 ntBASIC23.8■■□□□ 1.4
NBPF4Q96M43 AC008735.5-201ENST00000623544 497 ntBASIC23.8■■□□□ 1.4
NBPF4Q96M43 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF4Q96M43 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NBPF4Q96M43 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC23.8■■□□□ 1.4
NBPF4Q96M43 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF4Q96M43 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NBPF4Q96M43 AC097374.2-201ENST00000618617 1306 ntBASIC23.8■■□□□ 1.4
NBPF4Q96M43 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NBPF4Q96M43 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC23.79■■□□□ 1.4
NBPF4Q96M43 AC126763.1-201ENST00000552015 2118 ntBASIC23.79■■□□□ 1.4
NBPF4Q96M43 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC23.79■■□□□ 1.4
NBPF4Q96M43 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
NBPF4Q96M43 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
NBPF4Q96M43 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NBPF4Q96M43 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.79■■□□□ 1.4
NBPF4Q96M43 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NBPF4Q96M43 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF4Q96M43 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF4Q96M43 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.78■■□□□ 1.4
NBPF4Q96M43 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.78■■□□□ 1.4
NBPF4Q96M43 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF4Q96M43 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
NBPF4Q96M43 FAM220CP-201ENST00000395253 831 ntBASIC23.78■■□□□ 1.4
NBPF4Q96M43 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC23.78■■□□□ 1.4
NBPF4Q96M43 MIR1233-2-201ENST00000408138 82 ntBASIC23.78■■□□□ 1.4
NBPF4Q96M43 MIR1233-1-201ENST00000408722 82 ntBASIC23.78■■□□□ 1.4
NBPF4Q96M43 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC23.78■■□□□ 1.4
NBPF4Q96M43 CYGB-205ENST00000590175 830 ntTSL 3 BASIC23.78■■□□□ 1.4
NBPF4Q96M43 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC23.78■■□□□ 1.4
NBPF4Q96M43 AL356488.2-201ENST00000602755 427 ntBASIC23.78■■□□□ 1.4
NBPF4Q96M43 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC23.78■■□□□ 1.4
NBPF4Q96M43 AC107918.4-202ENST00000641623 219 ntBASIC23.78■■□□□ 1.4
NBPF4Q96M43 AP002414.3-201ENST00000589352 1468 ntBASIC23.78■■□□□ 1.4
NBPF4Q96M43 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF4Q96M43 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF4Q96M43 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF4Q96M43 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
NBPF4Q96M43 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF4Q96M43 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF4Q96M43 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
NBPF4Q96M43 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.78■■□□□ 1.4
NBPF4Q96M43 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NBPF4Q96M43 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF4Q96M43 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF4Q96M43 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF4Q96M43 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
NBPF4Q96M43 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.77■■□□□ 1.4
NBPF4Q96M43 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF4Q96M43 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
NBPF4Q96M43 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NBPF4Q96M43 CD9-202ENST00000382515 1229 ntTSL 5 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms