Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM11Q96F44 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM11Q96F44 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM11Q96F44 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM11Q96F44 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM11Q96F44 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM11Q96F44 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM11Q96F44 DUTP2-201ENST00000519164 463 ntBASIC19.21■□□□□ 0.67
TRIM11Q96F44 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM11Q96F44 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM11Q96F44 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM11Q96F44 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM11Q96F44 AC005332.8-201ENST00000622750 2735 ntBASIC19.21■□□□□ 0.67
TRIM11Q96F44 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM11Q96F44 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM11Q96F44 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.66
TRIM11Q96F44 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM11Q96F44 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM11Q96F44 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM11Q96F44 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 PVRIG2P-201ENST00000435460 978 ntBASIC19.2■□□□□ 0.66
TRIM11Q96F44 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM11Q96F44 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIM11Q96F44 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM11Q96F44 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TRIM11Q96F44 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRIM11Q96F44 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM11Q96F44 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRIM11Q96F44 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM11Q96F44 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.2■□□□□ 0.66
TRIM11Q96F44 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 AC034232.1-201ENST00000506026 1064 ntBASIC19.19■□□□□ 0.66
TRIM11Q96F44 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 AC145285.6-201ENST00000604632 637 ntBASIC19.19■□□□□ 0.66
TRIM11Q96F44 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.19■□□□□ 0.66
TRIM11Q96F44 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms