Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 YBX1P2-201ENST00000489612 999 ntBASIC18.7■□□□□ 0.58
HDAC11Q96DB2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 LETM1P2-201ENST00000597330 2178 ntBASIC18.7■□□□□ 0.58
HDAC11Q96DB2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 REXO1L9P-201ENST00000604264 2108 ntBASIC18.7■□□□□ 0.58
HDAC11Q96DB2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC11Q96DB2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.69■□□□□ 0.58
HDAC11Q96DB2 AC117947.1-201ENST00000427448 529 ntBASIC18.69■□□□□ 0.58
HDAC11Q96DB2 RASA4DP-201ENST00000460726 1199 ntBASIC18.69■□□□□ 0.58
HDAC11Q96DB2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 AC093010.1-201ENST00000473625 1624 ntBASIC18.69■□□□□ 0.58
HDAC11Q96DB2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HDAC11Q96DB2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 KRT18P57-201ENST00000443599 1254 ntBASIC18.68■□□□□ 0.58
HDAC11Q96DB2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 AC139887.4-201ENST00000607877 719 ntBASIC18.68■□□□□ 0.58
HDAC11Q96DB2 AC011558.1-201ENST00000623459 338 ntBASIC18.68■□□□□ 0.58
HDAC11Q96DB2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC11Q96DB2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HDAC11Q96DB2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms