Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 AP000867.4-201ENST00000641616 219 ntBASIC19.35■□□□□ 0.69
TIFAQ96CG3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIFAQ96CG3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TIFAQ96CG3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
TIFAQ96CG3 ELL2P1-201ENST00000413990 1906 ntBASIC19.35■□□□□ 0.69
TIFAQ96CG3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIFAQ96CG3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIFAQ96CG3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIFAQ96CG3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TIFAQ96CG3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 MIR149-201ENST00000384879 89 ntBASIC19.34■□□□□ 0.69
TIFAQ96CG3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TIFAQ96CG3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.34■□□□□ 0.69
TIFAQ96CG3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 AC093028.1-201ENST00000622998 982 ntBASIC19.34■□□□□ 0.69
TIFAQ96CG3 AL022326.1-202ENST00000641533 845 ntBASIC19.34■□□□□ 0.69
TIFAQ96CG3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TIFAQ96CG3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TIFAQ96CG3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TIFAQ96CG3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.34■□□□□ 0.69
TIFAQ96CG3 IRX1P1-201ENST00000438849 1838 ntBASIC19.34■□□□□ 0.69
TIFAQ96CG3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TIFAQ96CG3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TIFAQ96CG3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TIFAQ96CG3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.33■□□□□ 0.69
TIFAQ96CG3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
TIFAQ96CG3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
TIFAQ96CG3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.33■□□□□ 0.69
TIFAQ96CG3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TIFAQ96CG3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIFAQ96CG3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.33■□□□□ 0.68
TIFAQ96CG3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TIFAQ96CG3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TIFAQ96CG3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TIFAQ96CG3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.33■□□□□ 0.68
TIFAQ96CG3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.33■□□□□ 0.68
TIFAQ96CG3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.33■□□□□ 0.68
TIFAQ96CG3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.33■□□□□ 0.68
TIFAQ96CG3 AC136632.2-201ENST00000512891 861 ntBASIC19.33■□□□□ 0.68
TIFAQ96CG3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIFAQ96CG3 AL513190.1-201ENST00000621254 727 ntBASIC19.33■□□□□ 0.68
TIFAQ96CG3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
TIFAQ96CG3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TIFAQ96CG3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.33■□□□□ 0.68
TIFAQ96CG3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.33■□□□□ 0.68
TIFAQ96CG3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIFAQ96CG3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TIFAQ96CG3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.33■□□□□ 0.68
TIFAQ96CG3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIFAQ96CG3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIFAQ96CG3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TIFAQ96CG3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.33■□□□□ 0.68
TIFAQ96CG3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.33■□□□□ 0.68
TIFAQ96CG3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIFAQ96CG3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIFAQ96CG3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIFAQ96CG3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIFAQ96CG3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIFAQ96CG3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIFAQ96CG3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIFAQ96CG3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TIFAQ96CG3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIFAQ96CG3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 AC073621.1-201ENST00000392730 636 ntBASIC19.32■□□□□ 0.68
TIFAQ96CG3 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 KRT18P41-201ENST00000518924 1277 ntBASIC19.32■□□□□ 0.68
TIFAQ96CG3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 AC027612.4-201ENST00000605371 583 ntBASIC19.32■□□□□ 0.68
TIFAQ96CG3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIFAQ96CG3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.32■□□□□ 0.68
TIFAQ96CG3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIFAQ96CG3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms