Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC1Q92922 AC022898.2-201ENST00000616822 1312 ntBASIC23.13■■□□□ 1.29
SMARCC1Q92922 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 AP006288.1-201ENST00000446065 395 ntBASIC23.13■■□□□ 1.29
SMARCC1Q92922 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC1Q92922 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 AC064836.3-201ENST00000607928 673 ntBASIC23.13■■□□□ 1.29
SMARCC1Q92922 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 PMPCAP1-201ENST00000508114 1576 ntBASIC23.13■■□□□ 1.29
SMARCC1Q92922 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC1Q92922 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC1Q92922 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 AC211486.1-202ENST00000416371 468 ntBASIC23.12■■□□□ 1.29
SMARCC1Q92922 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 PRYP5-201ENST00000451909 266 ntBASIC23.12■■□□□ 1.29
SMARCC1Q92922 AC211476.1-201ENST00000503899 468 ntBASIC23.12■■□□□ 1.29
SMARCC1Q92922 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 COPE-211ENST00000600932 1144 ntTSL 5 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SMARCC1Q92922 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC1Q92922 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC1Q92922 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC1Q92922 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.11■■□□□ 1.29
SMARCC1Q92922 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC1Q92922 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.11■■□□□ 1.29
SMARCC1Q92922 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC1Q92922 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC23.11■■□□□ 1.29
SMARCC1Q92922 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
SMARCC1Q92922 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC23.11■■□□□ 1.29
SMARCC1Q92922 SLC4A1APP2-201ENST00000424054 1259 ntBASIC23.11■■□□□ 1.29
SMARCC1Q92922 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC23.11■■□□□ 1.29
SMARCC1Q92922 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC23.11■■□□□ 1.29
SMARCC1Q92922 RPS15-207ENST00000591032 550 ntTSL 3 BASIC23.11■■□□□ 1.29
SMARCC1Q92922 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
SMARCC1Q92922 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC23.11■■□□□ 1.29
SMARCC1Q92922 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC1Q92922 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.11■■□□□ 1.29
SMARCC1Q92922 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC1Q92922 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC1Q92922 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC1Q92922 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC1Q92922 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC1Q92922 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC1Q92922 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 AC073621.1-201ENST00000392730 636 ntBASIC23.1■■□□□ 1.29
SMARCC1Q92922 LBH-203ENST00000404397 543 ntTSL 4 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 MCCD1P2-201ENST00000423228 335 ntBASIC23.1■■□□□ 1.29
SMARCC1Q92922 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC1Q92922 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC1Q92922 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC1Q92922 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC1Q92922 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC1Q92922 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms