Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF4Q92544 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TM9SF4Q92544 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF4Q92544 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF4Q92544 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.15■□□□□ 0.34
TM9SF4Q92544 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF4Q92544 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.15■□□□□ 0.34
TM9SF4Q92544 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF4Q92544 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.15■□□□□ 0.34
TM9SF4Q92544 TSPY22P-201ENST00000427496 604 ntBASIC17.15■□□□□ 0.34
TM9SF4Q92544 KRT18P23-201ENST00000435622 1283 ntBASIC17.15■□□□□ 0.34
TM9SF4Q92544 AP002414.4-201ENST00000589764 1148 ntBASIC17.15■□□□□ 0.34
TM9SF4Q92544 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.15■□□□□ 0.34
TM9SF4Q92544 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF4Q92544 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF4Q92544 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF4Q92544 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF4Q92544 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.15■□□□□ 0.34
TM9SF4Q92544 KRT18P1-202ENST00000452408 1331 ntBASIC17.15■□□□□ 0.34
TM9SF4Q92544 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF4Q92544 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.15■□□□□ 0.34
TM9SF4Q92544 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.15■□□□□ 0.34
TM9SF4Q92544 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF4Q92544 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.15■□□□□ 0.34
TM9SF4Q92544 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TM9SF4Q92544 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TM9SF4Q92544 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TM9SF4Q92544 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TM9SF4Q92544 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TM9SF4Q92544 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.14■□□□□ 0.33
TM9SF4Q92544 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TM9SF4Q92544 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TM9SF4Q92544 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.14■□□□□ 0.33
TM9SF4Q92544 MIR662-201ENST00000384847 95 ntBASIC17.14■□□□□ 0.33
TM9SF4Q92544 RN7SL510P-201ENST00000581311 263 ntBASIC17.14■□□□□ 0.33
TM9SF4Q92544 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.14■□□□□ 0.33
TM9SF4Q92544 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.14■□□□□ 0.33
TM9SF4Q92544 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TM9SF4Q92544 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.14■□□□□ 0.33
TM9SF4Q92544 AC020916.1-201ENST00000587762 1774 ntBASIC17.14■□□□□ 0.33
TM9SF4Q92544 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.14■□□□□ 0.33
TM9SF4Q92544 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.14■□□□□ 0.33
TM9SF4Q92544 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TM9SF4Q92544 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF4Q92544 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 HOXB1-202ENST00000577092 1414 ntBASIC17.13■□□□□ 0.33
TM9SF4Q92544 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 RCC2P3-201ENST00000418112 1537 ntBASIC17.13■□□□□ 0.33
TM9SF4Q92544 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms