Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 KRT8P11-201ENST00000409686 1436 ntBASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L1Q8WWY6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 PRSS44-201ENST00000515154 1146 ntBASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 AC005837.3-201ENST00000612163 286 ntBASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L1Q8WWY6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms