Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
SMIM4Q8WVI0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 AC106886.4-201ENST00000623557 2502 ntBASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SMIM4Q8WVI0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 AC091874.3-201ENST00000512672 1195 ntBASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 PNMA6B-201ENST00000538162 1200 ntBASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
SMIM4Q8WVI0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 AGGF1P2-201ENST00000426656 2106 ntBASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SMIM4Q8WVI0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 PCDH8P1-201ENST00000428983 2773 ntBASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 AL162727.3-201ENST00000635661 2787 ntBASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SMIM4Q8WVI0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms