Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCD2Q8WV60 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTCD2Q8WV60 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCD2Q8WV60 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.41■□□□□ 0.54
PTCD2Q8WV60 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCD2Q8WV60 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCD2Q8WV60 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.41■□□□□ 0.54
PTCD2Q8WV60 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCD2Q8WV60 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.41■□□□□ 0.54
PTCD2Q8WV60 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.4■□□□□ 0.54
PTCD2Q8WV60 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 SPDYE13P-201ENST00000445314 798 ntBASIC18.4■□□□□ 0.54
PTCD2Q8WV60 AC092597.1-201ENST00000487352 616 ntBASIC18.4■□□□□ 0.54
PTCD2Q8WV60 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 AC083849.1-201ENST00000615227 514 ntBASIC18.4■□□□□ 0.54
PTCD2Q8WV60 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCD2Q8WV60 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTCD2Q8WV60 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTCD2Q8WV60 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTCD2Q8WV60 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTCD2Q8WV60 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.39■□□□□ 0.54
PTCD2Q8WV60 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTCD2Q8WV60 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.39■□□□□ 0.54
PTCD2Q8WV60 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 AC093010.1-201ENST00000473625 1624 ntBASIC18.39■□□□□ 0.53
PTCD2Q8WV60 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 STARP1-201ENST00000397973 869 ntBASIC18.39■□□□□ 0.53
PTCD2Q8WV60 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 FAM86EP-206ENST00000510506 987 ntBASIC18.39■□□□□ 0.53
PTCD2Q8WV60 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCD2Q8WV60 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 AC068880.1-201ENST00000507289 2297 ntBASIC18.38■□□□□ 0.53
PTCD2Q8WV60 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCD2Q8WV60 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PTCD2Q8WV60 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCD2Q8WV60 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCD2Q8WV60 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTCD2Q8WV60 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTCD2Q8WV60 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PTCD2Q8WV60 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCD2Q8WV60 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PTCD2Q8WV60 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
PTCD2Q8WV60 AL845331.1-201ENST00000424978 1190 ntBASIC18.37■□□□□ 0.53
PTCD2Q8WV60 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCD2Q8WV60 RASA4DP-201ENST00000460726 1199 ntBASIC18.37■□□□□ 0.53
PTCD2Q8WV60 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms