Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 AC005332.3-201ENST00000589904 676 ntBASIC19.22■□□□□ 0.67
UBA3Q8TBC4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBA3Q8TBC4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 IGHGP-201ENST00000390555 1178 ntBASIC19.21■□□□□ 0.67
UBA3Q8TBC4 PCED1CP-201ENST00000419887 785 ntBASIC19.21■□□□□ 0.67
UBA3Q8TBC4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 AL358472.4-201ENST00000633140 710 ntBASIC19.21■□□□□ 0.67
UBA3Q8TBC4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 KRT89P-201ENST00000620027 1478 ntBASIC19.21■□□□□ 0.67
UBA3Q8TBC4 HCG11-201ENST00000411553 5696 ntBASIC19.21■□□□□ 0.67
UBA3Q8TBC4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBA3Q8TBC4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
UBA3Q8TBC4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 AC093010.1-201ENST00000473625 1624 ntBASIC19.2■□□□□ 0.66
UBA3Q8TBC4 Z83836.1-201ENST00000624605 1642 ntBASIC19.2■□□□□ 0.66
UBA3Q8TBC4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 AC132938.6-201ENST00000623828 1655 ntBASIC19.2■□□□□ 0.66
UBA3Q8TBC4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBA3Q8TBC4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms