Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BBS1Q8NFJ9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BBS1Q8NFJ9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BBS1Q8NFJ9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 LINC01126-201ENST00000623515 1646 ntBASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
BBS1Q8NFJ9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 AL359736.2-201ENST00000621992 437 ntBASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 FAM197Y4-202ENST00000622692 608 ntBASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.34■□□□□ 0.21
BBS1Q8NFJ9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BBS1Q8NFJ9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BBS1Q8NFJ9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
BBS1Q8NFJ9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BBS1Q8NFJ9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.33■□□□□ 0.21
BBS1Q8NFJ9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 AC097488.1-201ENST00000507834 756 ntBASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 DGCR10-201ENST00000609839 495 ntBASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 KRT18P55-202ENST00000578578 1546 ntBASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
BBS1Q8NFJ9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS1Q8NFJ9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.32■□□□□ 0.2
BBS1Q8NFJ9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BBS1Q8NFJ9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms