Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 AC068472.1-201ENST00000474589 881 ntBASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 GUSBP12-201ENST00000513727 720 ntBASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 AC092119.3-201ENST00000612618 583 ntBASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 IGHV3-41-201ENST00000613121 348 ntBASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 AC124864.1-201ENST00000623408 392 ntBASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 KRT18P1-202ENST00000452408 1331 ntBASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 TPSP2-201ENST00000561760 610 ntBASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01555Q8NAE3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 AP000997.3-201ENST00000623333 2250 ntBASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 DRAXINP1-201ENST00000437611 948 ntBASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 DUTP2-201ENST00000519164 463 ntBASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01555Q8NAE3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms