Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 AL732292.2-201ENST00000609649 430 ntBASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 LETM1P2-201ENST00000597330 2178 ntBASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC155Q8N6L0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 AP003733.1-201ENST00000491725 852 ntBASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 Z83836.1-201ENST00000624605 1642 ntBASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC155Q8N6L0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 AL499627.1-201ENST00000569373 2188 ntBASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 EMBP1-201ENST00000458200 901 ntBASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 FOSL1P1-201ENST00000511041 816 ntBASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC155Q8N6L0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 PVRIG2P-201ENST00000435460 978 ntBASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 KRT18P31-201ENST00000506277 1292 ntBASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 MIR3180-4-201ENST00000582223 153 ntBASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC155Q8N6L0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms