Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VPS52Q8N1B4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS52Q8N1B4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS52Q8N1B4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS52Q8N1B4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS52Q8N1B4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 IGHV3-47-201ENST00000425060 335 ntBASIC19.68■□□□□ 0.74
VPS52Q8N1B4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 RN7SL606P-201ENST00000472779 293 ntBASIC19.68■□□□□ 0.74
VPS52Q8N1B4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 AC009065.1-201ENST00000564055 1225 ntBASIC19.68■□□□□ 0.74
VPS52Q8N1B4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS52Q8N1B4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 AP002469.2-201ENST00000531724 424 ntBASIC19.67■□□□□ 0.74
VPS52Q8N1B4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 AL353801.3-201ENST00000609898 542 ntBASIC19.67■□□□□ 0.74
VPS52Q8N1B4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 AL353692.3-201ENST00000407031 1396 ntBASIC19.67■□□□□ 0.74
VPS52Q8N1B4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 Z98044.1-201ENST00000632503 1764 ntBASIC19.67■□□□□ 0.74
VPS52Q8N1B4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS52Q8N1B4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 KRT16P4-201ENST00000453883 522 ntBASIC19.66■□□□□ 0.74
VPS52Q8N1B4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS52Q8N1B4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
VPS52Q8N1B4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms