Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLX4Q8IY92 AC148477.5-201ENST00000625164 1645 ntBASIC22.01■■□□□ 1.11
SLX4Q8IY92 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLX4Q8IY92 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLX4Q8IY92 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLX4Q8IY92 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 AL078644.1-201ENST00000609881 752 ntBASIC22.01■■□□□ 1.11
SLX4Q8IY92 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLX4Q8IY92 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLX4Q8IY92 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SLX4Q8IY92 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SLX4Q8IY92 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22■■□□□ 1.11
SLX4Q8IY92 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22■■□□□ 1.11
SLX4Q8IY92 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
SLX4Q8IY92 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLX4Q8IY92 PNMT-202ENST00000394246 821 ntTSL 2 BASIC22■■□□□ 1.11
SLX4Q8IY92 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC22■■□□□ 1.11
SLX4Q8IY92 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC22■■□□□ 1.11
SLX4Q8IY92 CNN2P11-201ENST00000429351 262 ntBASIC22■■□□□ 1.11
SLX4Q8IY92 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC22■■□□□ 1.11
SLX4Q8IY92 HCG4B-203ENST00000450128 991 ntBASIC22■■□□□ 1.11
SLX4Q8IY92 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC22■■□□□ 1.11
SLX4Q8IY92 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22■■□□□ 1.11
SLX4Q8IY92 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC22■■□□□ 1.11
SLX4Q8IY92 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLX4Q8IY92 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLX4Q8IY92 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SLX4Q8IY92 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SLX4Q8IY92 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SLX4Q8IY92 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SLX4Q8IY92 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLX4Q8IY92 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.99■■□□□ 1.11
SLX4Q8IY92 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SLX4Q8IY92 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.99■■□□□ 1.11
SLX4Q8IY92 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SLX4Q8IY92 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.99■■□□□ 1.11
SLX4Q8IY92 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLX4Q8IY92 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.99■■□□□ 1.11
SLX4Q8IY92 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.99■■□□□ 1.11
SLX4Q8IY92 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.99■■□□□ 1.11
SLX4Q8IY92 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLX4Q8IY92 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.99■■□□□ 1.11
SLX4Q8IY92 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLX4Q8IY92 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLX4Q8IY92 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLX4Q8IY92 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.99■■□□□ 1.11
SLX4Q8IY92 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLX4Q8IY92 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLX4Q8IY92 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.99■■□□□ 1.11
SLX4Q8IY92 AC005593.1-201ENST00000624894 515 ntBASIC21.99■■□□□ 1.11
SLX4Q8IY92 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
SLX4Q8IY92 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
SLX4Q8IY92 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLX4Q8IY92 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.98■■□□□ 1.11
SLX4Q8IY92 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.98■■□□□ 1.11
SLX4Q8IY92 AC006504.4-201ENST00000592118 1568 ntBASIC21.98■■□□□ 1.11
SLX4Q8IY92 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLX4Q8IY92 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SLX4Q8IY92 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.98■■□□□ 1.11
SLX4Q8IY92 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLX4Q8IY92 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLX4Q8IY92 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.98■■□□□ 1.11
SLX4Q8IY92 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.98■■□□□ 1.11
SLX4Q8IY92 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.98■■□□□ 1.11
SLX4Q8IY92 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.98■■□□□ 1.11
SLX4Q8IY92 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SLX4Q8IY92 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.98■■□□□ 1.11
SLX4Q8IY92 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.98■■□□□ 1.11
SLX4Q8IY92 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLX4Q8IY92 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLX4Q8IY92 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.98■■□□□ 1.11
SLX4Q8IY92 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLX4Q8IY92 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLX4Q8IY92 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLX4Q8IY92 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.97■■□□□ 1.11
SLX4Q8IY92 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLX4Q8IY92 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SLX4Q8IY92 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.97■■□□□ 1.11
SLX4Q8IY92 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.97■■□□□ 1.11
SLX4Q8IY92 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SLX4Q8IY92 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SLX4Q8IY92 PRYP5-201ENST00000451909 266 ntBASIC21.97■■□□□ 1.11
SLX4Q8IY92 AC122714.2-201ENST00000502787 707 ntBASIC21.97■■□□□ 1.11
SLX4Q8IY92 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SLX4Q8IY92 SPCS2P1-201ENST00000561636 679 ntBASIC21.97■■□□□ 1.11
SLX4Q8IY92 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
SLX4Q8IY92 C20orf181-201ENST00000623918 480 ntBASIC21.97■■□□□ 1.11
SLX4Q8IY92 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SLX4Q8IY92 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLX4Q8IY92 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLX4Q8IY92 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLX4Q8IY92 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.97■■□□□ 1.11
SLX4Q8IY92 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms