Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 WIZP1-201ENST00000531444 2299 ntBASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 AL691432.3-201ENST00000621860 400 ntBASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCN4BQ8IWT1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 AL845331.1-201ENST00000424978 1190 ntBASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 AP005901.3-202ENST00000581653 237 ntBASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 AL732292.2-201ENST00000609649 430 ntBASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCN4BQ8IWT1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 MINOS1P3-201ENST00000457048 203 ntBASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 NSUN5P1-202ENST00000421140 1535 ntBASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 NSUN5P2-203ENST00000457352 1529 ntBASIC19.1■□□□□ 0.65
SCN4BQ8IWT1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 AC073592.3-201ENST00000625118 1834 ntBASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 IGHV3-47-201ENST00000425060 335 ntBASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 AL121772.3-201ENST00000610840 674 ntBASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 AC004408.2-201ENST00000623613 2777 ntBASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SCN4BQ8IWT1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN4BQ8IWT1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms