Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 AC211429.1-201ENST00000415277 523 ntBASIC16.18■□□□□ 0.18
LRRC28Q86X40 AC004951.3-201ENST00000418645 1148 ntBASIC16.18■□□□□ 0.18
LRRC28Q86X40 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.18■□□□□ 0.18
LRRC28Q86X40 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 RCC2P6-201ENST00000526625 1557 ntBASIC16.17■□□□□ 0.18
LRRC28Q86X40 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 AP000525.1-201ENST00000608286 694 ntBASIC16.17■□□□□ 0.18
LRRC28Q86X40 DGCR10-201ENST00000609839 495 ntBASIC16.17■□□□□ 0.18
LRRC28Q86X40 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRRC28Q86X40 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC28Q86X40 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC28Q86X40 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC28Q86X40 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC28Q86X40 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC28Q86X40 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRRC28Q86X40 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC28Q86X40 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC28Q86X40 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC28Q86X40 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LRRC28Q86X40 AC087499.1-201ENST00000418141 1075 ntBASIC16.16■□□□□ 0.18
LRRC28Q86X40 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
LRRC28Q86X40 Z85996.1-201ENST00000494644 937 ntBASIC16.16■□□□□ 0.18
LRRC28Q86X40 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC28Q86X40 FITM1-202ENST00000559294 800 ntBASIC16.16■□□□□ 0.18
LRRC28Q86X40 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC28Q86X40 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC28Q86X40 AC011298.2-201ENST00000617989 482 ntBASIC16.16■□□□□ 0.18
LRRC28Q86X40 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC28Q86X40 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC28Q86X40 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRRC28Q86X40 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms