Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 ESPNP-201ENST00000270691 2015 ntBASIC17.4■□□□□ 0.38
RNF44Q7L0R7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 BX276092.5-203ENST00000456199 560 ntBASIC17.4■□□□□ 0.38
RNF44Q7L0R7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
RNF44Q7L0R7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RNF44Q7L0R7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF44Q7L0R7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.39■□□□□ 0.38
RNF44Q7L0R7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF44Q7L0R7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RNF44Q7L0R7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
RNF44Q7L0R7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.39■□□□□ 0.37
RNF44Q7L0R7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.39■□□□□ 0.37
RNF44Q7L0R7 AC004263.2-201ENST00000617183 678 ntBASIC17.39■□□□□ 0.37
RNF44Q7L0R7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 AL353692.3-201ENST00000407031 1396 ntBASIC17.39■□□□□ 0.37
RNF44Q7L0R7 AC016734.2-201ENST00000624325 1377 ntBASIC17.39■□□□□ 0.37
RNF44Q7L0R7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF44Q7L0R7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF44Q7L0R7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 CHCHD2P8-201ENST00000429873 447 ntBASIC17.37■□□□□ 0.37
RNF44Q7L0R7 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms