Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.072e-6■□□□□ 11.3
LARP4Q71RC2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.13e-8■□□□□ 11.3
LARP4Q71RC2 VWCE-201ENST00000301770 3368 ntTSL 1 (best)14.4□□□□□ -0.13e-8■□□□□ 11.3
LARP4Q71RC2 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.48□□□□□ -0.253e-8■□□□□ 11.3
LARP4Q71RC2 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC12.01□□□□□ -0.493e-8■□□□□ 11.3
LARP4Q71RC2 SRP14-208ENST00000560773 468 ntTSL 3 BASIC11.76□□□□□ -0.534e-10■□□□□ 11.3
LARP4Q71RC2 SRP14-206ENST00000559439 743 ntTSL 36.41□□□□□ -1.384e-10■□□□□ 11.3
LARP4Q71RC2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.742e-15■□□□□ 11.3
LARP4Q71RC2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.42e-15■□□□□ 11.3
LARP4Q71RC2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.636e-11■□□□□ 11.3
LARP4Q71RC2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.346e-11■□□□□ 11.3
LARP4Q71RC2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.136e-11■□□□□ 11.3
LARP4Q71RC2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 06e-11■□□□□ 11.3
LARP4Q71RC2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.179e-8■□□□□ 11.3
LARP4Q71RC2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.38■□□□□ 0.211e-9■□□□□ 11.3
LARP4Q71RC2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.68□□□□□ -0.061e-9■□□□□ 11.3
LARP4Q71RC2 CYB5R3-208ENST00000470741 3938 ntTSL 1 (best)13.41□□□□□ -0.261e-9■□□□□ 11.3
LARP4Q71RC2 CYB5R3-202ENST00000361740 2938 ntTSL 2 BASIC11.38□□□□□ -0.591e-9■□□□□ 11.3
LARP4Q71RC2 TMEM18-207ENST00000477202 1767 ntTSL 221■□□□□ 0.955e-7■□□□□ 11.3
LARP4Q71RC2 TMEM18-208ENST00000497508 1706 ntTSL 214.27□□□□□ -0.135e-7■□□□□ 11.3
LARP4Q71RC2 TMEM18-205ENST00000432667 2572 ntTSL 514.04□□□□□ -0.165e-7■□□□□ 11.3
LARP4Q71RC2 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.445e-7■□□□□ 11.3
LARP4Q71RC2 TMEM18-202ENST00000355654 2376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.515e-7■□□□□ 11.3
LARP4Q71RC2 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.65e-7■□□□□ 11.3
LARP4Q71RC2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.141e-9■□□□□ 11.3
LARP4Q71RC2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.452e-8■□□□□ 11.3
LARP4Q71RC2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.077e-7■□□□□ 11.3
LARP4Q71RC2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.07■□□□□ 0.82e-8■□□□□ 11.3
LARP4Q71RC2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.067e-7■□□□□ 11.3
LARP4Q71RC2 P4HA2-204ENST00000379100 2563 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.557e-7■□□□□ 11.3
LARP4Q71RC2 P4HA2-205ENST00000379104 2569 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.557e-7■□□□□ 11.3
LARP4Q71RC2 P4HA2-203ENST00000379086 2223 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.727e-7■□□□□ 11.3
LARP4Q71RC2 P4HA2-207ENST00000401867 3349 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.767e-7■□□□□ 11.3
LARP4Q71RC2 P4HA2-218ENST00000474628 743 ntTSL 27.5□□□□□ -1.217e-7■□□□□ 11.3
LARP4Q71RC2 RALY-209ENST00000489384 227 ntTSL 36.43□□□□□ -1.381e-7■□□□□ 11.3
LARP4Q71RC2 CYB5A-205ENST00000579064 305 ntTSL 26.29□□□□□ -1.43e-11■□□□□ 11.3
LARP4Q71RC2 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC12.35□□□□□ -0.439e-8■□□□□ 11.3
LARP4Q71RC2 TGFBI-204ENST00000504411 1033 ntTSL 29.15□□□□□ -0.949e-8■□□□□ 11.3
LARP4Q71RC2 FUCA2-202ENST00000367585 646 ntTSL 416.93■□□□□ 0.31e-6■□□□□ 11.3
LARP4Q71RC2 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.97■□□□□ 0.474e-9■□□□□ 11.2
LARP4Q71RC2 POR-216ENST00000454934 2295 ntTSL 316.48■□□□□ 0.234e-9■□□□□ 11.2
LARP4Q71RC2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.184e-9■□□□□ 11.2
LARP4Q71RC2 POR-222ENST00000493973 1028 ntTSL 215.57■□□□□ 0.084e-9■□□□□ 11.2
LARP4Q71RC2 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.46■□□□□ 0.074e-9■□□□□ 11.2
LARP4Q71RC2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.73■□□□□ 0.755e-9■□□□□ 11.2
LARP4Q71RC2 EGFL7-207ENST00000492862 723 ntTSL 516.35■□□□□ 0.215e-9■□□□□ 11.2
LARP4Q71RC2 EGFL7-205ENST00000490469 456 ntTSL 515.71■□□□□ 0.115e-9■□□□□ 11.2
LARP4Q71RC2 CAPZA1-201ENST00000263168 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.715e-9■□□□□ 11.2
LARP4Q71RC2 CAPZA1-202ENST00000466066 765 ntTSL 29.17□□□□□ -0.945e-9■□□□□ 11.2
LARP4Q71RC2 TAF7-202ENST00000624699 517 ntTSL 36.69□□□□□ -1.345e-9■□□□□ 11.2
LARP4Q71RC2 CAPZA1-204ENST00000476936 867 ntTSL 35.24□□□□□ -1.575e-9■□□□□ 11.2
LARP4Q71RC2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.071e-9■□□□□ 11.2
LARP4Q71RC2 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.82□□□□□ -1.481e-9■□□□□ 11.2
LARP4Q71RC2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.39■□□□□ 0.865e-7■□□□□ 11.2
LARP4Q71RC2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.585e-7■□□□□ 11.2
LARP4Q71RC2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.365e-7■□□□□ 11.2
LARP4Q71RC2 ALG3-202ENST00000411922 1452 ntTSL 1 (best)15.85■□□□□ 0.135e-7■□□□□ 11.2
LARP4Q71RC2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.71□□□□□ -0.065e-7■□□□□ 11.2
LARP4Q71RC2 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.79□□□□□ -0.25e-7■□□□□ 11.2
LARP4Q71RC2 MAF1-206ENST00000534811 632 ntTSL 212.73□□□□□ -0.375e-7■□□□□ 11.2
LARP4Q71RC2 ALG3-213ENST00000485912 995 ntTSL 29.94□□□□□ -0.825e-7■□□□□ 11.2
LARP4Q71RC2 CTBP1-215ENST00000514596 648 ntTSL 217.29■□□□□ 0.367e-7■□□□□ 11.2
LARP4Q71RC2 CTBP1-204ENST00000503594 1108 ntTSL 217.06■□□□□ 0.327e-7■□□□□ 11.2
LARP4Q71RC2 AURKAIP1-205ENST00000489799 695 ntTSL 1 (best)22.71■■□□□ 1.232e-6■□□□□ 11.2
LARP4Q71RC2 FBL-205ENST00000595545 896 ntTSL 27.52□□□□□ -1.212e-7■□□□□ 11.2
LARP4Q71RC2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.73■□□□□ 0.113e-6■□□□□ 11.2
LARP4Q71RC2 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.23e-6■□□□□ 11.2
LARP4Q71RC2 PDK2-216ENST00000614357 2493 ntTSL 5 BASIC11.72□□□□□ -0.533e-6■□□□□ 11.2
LARP4Q71RC2 SLC2A1-205ENST00000475162 598 ntTSL 512.77□□□□□ -0.376e-19■□□□□ 11.2
LARP4Q71RC2 TMED9-204ENST00000507723 1018 ntTSL 213.34□□□□□ -0.274e-14■□□□□ 11.2
LARP4Q71RC2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.015e-14■□□□□ 11.2
LARP4Q71RC2 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.335e-14■□□□□ 11.2
LARP4Q71RC2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.385e-14■□□□□ 11.2
LARP4Q71RC2 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.385e-14■□□□□ 11.2
LARP4Q71RC2 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.828e-24■□□□□ 11.2
LARP4Q71RC2 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.848e-24■□□□□ 11.2
LARP4Q71RC2 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.968e-24■□□□□ 11.2
LARP4Q71RC2 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.048e-24■□□□□ 11.2
LARP4Q71RC2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.974e-10■□□□□ 11.2
LARP4Q71RC2 ICAM5-203ENST00000586480 2599 ntTSL 1 (best)19.88■□□□□ 0.774e-10■□□□□ 11.2
LARP4Q71RC2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.769e-7■□□□□ 11.2
LARP4Q71RC2 TMEM189-205ENST00000453505 2028 ntTSL 1 (best)19.8■□□□□ 0.769e-7■□□□□ 11.2
LARP4Q71RC2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.349e-7■□□□□ 11.2
LARP4Q71RC2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.31■□□□□ 0.049e-7■□□□□ 11.2
LARP4Q71RC2 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.249e-7■□□□□ 11.2
LARP4Q71RC2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.781e-6■□□□□ 11.2
LARP4Q71RC2 NINJ1-204ENST00000489274 2026 ntTSL 214.42□□□□□ -0.11e-6■□□□□ 11.2
LARP4Q71RC2 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.081e-27■□□□□ 11.2
LARP4Q71RC2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.21□□□□□ -0.132e-13■□□□□ 11.2
LARP4Q71RC2 RANBP1-213ENST00000486575 2177 ntTSL 221.31■■□□□ 11e-10■□□□□ 11.2
LARP4Q71RC2 RANBP1-210ENST00000435265 1879 ntTSL 218.89■□□□□ 0.611e-10■□□□□ 11.2
LARP4Q71RC2 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.211e-10■□□□□ 11.2
LARP4Q71RC2 MAN1B1-216ENST00000550113 774 ntTSL 316.03■□□□□ 0.162e-7■□□□□ 11.2
LARP4Q71RC2 MAN1B1-203ENST00000474902 2336 ntTSL 215.31■□□□□ 0.042e-7■□□□□ 11.2
LARP4Q71RC2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.032e-7■□□□□ 11.2
LARP4Q71RC2 MAN1B1-204ENST00000475449 905 ntTSL 314.42□□□□□ -0.12e-7■□□□□ 11.2
LARP4Q71RC2 MAN1B1-209ENST00000536349 5048 ntTSL 214.19□□□□□ -0.142e-7■□□□□ 11.2
LARP4Q71RC2 MAN1B1-205ENST00000480100 3483 ntTSL 212.79□□□□□ -0.362e-7■□□□□ 11.2
LARP4Q71RC2 MAN1B1-206ENST00000535028 3886 ntTSL 210.92□□□□□ -0.662e-7■□□□□ 11.2
LARP4Q71RC2 MAN1B1-211ENST00000540391 3940 ntTSL 210.65□□□□□ -0.712e-7■□□□□ 11.2
Retrieved 100 of 15,922 protein–RNA pairs in 267.5 ms