Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.72■□□□□ 0.91
ATL3Q6DD88 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
ATL3Q6DD88 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.72■□□□□ 0.91
ATL3Q6DD88 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.72■□□□□ 0.91
ATL3Q6DD88 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
ATL3Q6DD88 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ATL3Q6DD88 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATL3Q6DD88 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATL3Q6DD88 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 MIR3917-201ENST00000580971 93 ntBASIC20.71■□□□□ 0.91
ATL3Q6DD88 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.71■□□□□ 0.91
ATL3Q6DD88 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATL3Q6DD88 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ATL3Q6DD88 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ATL3Q6DD88 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATL3Q6DD88 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.7■□□□□ 0.9
ATL3Q6DD88 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
ATL3Q6DD88 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.7■□□□□ 0.9
ATL3Q6DD88 AL355075.4-201ENST00000554988 638 ntBASIC20.7■□□□□ 0.9
ATL3Q6DD88 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
ATL3Q6DD88 AC092865.7-201ENST00000641832 219 ntBASIC20.7■□□□□ 0.9
ATL3Q6DD88 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.7■□□□□ 0.9
ATL3Q6DD88 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.7■□□□□ 0.9
ATL3Q6DD88 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
ATL3Q6DD88 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.7■□□□□ 0.9
ATL3Q6DD88 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATL3Q6DD88 PRORSD1P-202ENST00000563365 2154 ntBASIC20.69■□□□□ 0.9
ATL3Q6DD88 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATL3Q6DD88 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.69■□□□□ 0.9
ATL3Q6DD88 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATL3Q6DD88 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATL3Q6DD88 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATL3Q6DD88 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATL3Q6DD88 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATL3Q6DD88 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATL3Q6DD88 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.69■□□□□ 0.9
ATL3Q6DD88 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.69■□□□□ 0.9
ATL3Q6DD88 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.69■□□□□ 0.9
ATL3Q6DD88 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.69■□□□□ 0.9
ATL3Q6DD88 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.69■□□□□ 0.9
ATL3Q6DD88 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.69■□□□□ 0.9
ATL3Q6DD88 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATL3Q6DD88 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.69■□□□□ 0.9
ATL3Q6DD88 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ATL3Q6DD88 AP006294.2-201ENST00000641667 209 ntBASIC20.69■□□□□ 0.9
ATL3Q6DD88 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms