Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.13■□□□□ 0.33
LPCAT4Q643R3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 AC099343.3-201ENST00000605834 2503 ntBASIC17.12■□□□□ 0.33
LPCAT4Q643R3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 RAP2CP1-201ENST00000605103 478 ntBASIC17.12■□□□□ 0.33
LPCAT4Q643R3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LPCAT4Q643R3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 AC034268.1-201ENST00000441047 882 ntBASIC17.11■□□□□ 0.33
LPCAT4Q643R3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 HTR7P1-201ENST00000538670 1336 ntBASIC17.11■□□□□ 0.33
LPCAT4Q643R3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.11■□□□□ 0.33
LPCAT4Q643R3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms