Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 AC064836.3-201ENST00000607928 673 ntBASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 MIR1199-201ENST00000621445 119 ntBASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
CDC42BPAQ5VT25 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 SPDYE21P-201ENST00000413323 827 ntBASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 AP006288.1-201ENST00000446065 395 ntBASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 AC136632.2-201ENST00000512891 861 ntBASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 AC002310.6-201ENST00000624451 1377 ntBASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC27.31■■□□□ 1.96
CDC42BPAQ5VT25 AC097374.2-201ENST00000618617 1306 ntBASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 AC108073.2-201ENST00000464002 357 ntBASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 ADM-208ENST00000534464 1640 ntTSL 2 BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 AL353593.2-201ENST00000602529 1483 ntBASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 AC023274.1-201ENST00000418278 595 ntBASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 AL022326.1-202ENST00000641533 845 ntBASIC27.3■■□□□ 1.96
CDC42BPAQ5VT25 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC27.29■■□□□ 1.96
CDC42BPAQ5VT25 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CDC42BPAQ5VT25 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC27.29■■□□□ 1.96
CDC42BPAQ5VT25 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CDC42BPAQ5VT25 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDC42BPAQ5VT25 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDC42BPAQ5VT25 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
CDC42BPAQ5VT25 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC27.29■■□□□ 1.96
CDC42BPAQ5VT25 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC27.29■■□□□ 1.96
CDC42BPAQ5VT25 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
CDC42BPAQ5VT25 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDC42BPAQ5VT25 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 HNRNPA1P28-201ENST00000424481 961 ntBASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 AC134684.3-201ENST00000641758 218 ntBASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC27.28■■□□□ 1.96
CDC42BPAQ5VT25 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDC42BPAQ5VT25 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms