Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 FAM210CP-201ENST00000445714 574 ntBASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 ZNF444P1-201ENST00000559497 298 ntBASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 LINC00167-201ENST00000530583 1419 ntBASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
TMEM35AQ53FP2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 AC022898.2-201ENST00000616822 1312 ntBASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 AC132938.6-201ENST00000623828 1655 ntBASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 AL671277.2-201ENST00000458060 996 ntBASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms