Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CACNA1EQ15878 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA1EQ15878 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA1EQ15878 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA1EQ15878 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA1EQ15878 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA1EQ15878 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA1EQ15878 HTR5BP-201ENST00000430851 1154 ntBASIC17.6■□□□□ 0.41
CACNA1EQ15878 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA1EQ15878 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA1EQ15878 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.6■□□□□ 0.41
CACNA1EQ15878 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA1EQ15878 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA1EQ15878 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CACNA1EQ15878 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA1EQ15878 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CACNA1EQ15878 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA1EQ15878 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA1EQ15878 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA1EQ15878 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA1EQ15878 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA1EQ15878 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA1EQ15878 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
CACNA1EQ15878 MIR1199-201ENST00000621445 119 ntBASIC17.6■□□□□ 0.41
CACNA1EQ15878 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.6■□□□□ 0.41
CACNA1EQ15878 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA1EQ15878 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA1EQ15878 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA1EQ15878 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA1EQ15878 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA1EQ15878 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CACNA1EQ15878 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA1EQ15878 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.59■□□□□ 0.41
CACNA1EQ15878 PMPCAP1-201ENST00000508114 1576 ntBASIC17.59■□□□□ 0.41
CACNA1EQ15878 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.59■□□□□ 0.41
CACNA1EQ15878 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.59■□□□□ 0.41
CACNA1EQ15878 MCCD1P2-201ENST00000423228 335 ntBASIC17.59■□□□□ 0.41
CACNA1EQ15878 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.59■□□□□ 0.41
CACNA1EQ15878 METTL21AP1-201ENST00000438852 635 ntBASIC17.59■□□□□ 0.41
CACNA1EQ15878 MIR3687-2-201ENST00000577708 61 ntBASIC17.59■□□□□ 0.41
CACNA1EQ15878 AL596442.2-201ENST00000610240 980 ntBASIC17.59■□□□□ 0.41
CACNA1EQ15878 MIR3687-1-201ENST00000614492 61 ntBASIC17.59■□□□□ 0.41
CACNA1EQ15878 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA1EQ15878 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CACNA1EQ15878 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CACNA1EQ15878 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.59■□□□□ 0.41
CACNA1EQ15878 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.59■□□□□ 0.41
CACNA1EQ15878 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA1EQ15878 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA1EQ15878 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA1EQ15878 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA1EQ15878 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.59■□□□□ 0.41
CACNA1EQ15878 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.59■□□□□ 0.41
CACNA1EQ15878 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CACNA1EQ15878 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CACNA1EQ15878 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.58■□□□□ 0.41
CACNA1EQ15878 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CACNA1EQ15878 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.58■□□□□ 0.41
CACNA1EQ15878 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CACNA1EQ15878 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.58■□□□□ 0.41
CACNA1EQ15878 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CACNA1EQ15878 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CACNA1EQ15878 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.58■□□□□ 0.41
CACNA1EQ15878 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CACNA1EQ15878 AC112482.1-201ENST00000492080 688 ntBASIC17.58■□□□□ 0.41
CACNA1EQ15878 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
CACNA1EQ15878 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.58■□□□□ 0.41
CACNA1EQ15878 AC083906.6-201ENST00000641366 219 ntBASIC17.58■□□□□ 0.41
CACNA1EQ15878 AC079781.4-201ENST00000641908 219 ntBASIC17.58■□□□□ 0.41
CACNA1EQ15878 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.58■□□□□ 0.4
CACNA1EQ15878 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNA1EQ15878 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA1EQ15878 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.58■□□□□ 0.4
CACNA1EQ15878 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA1EQ15878 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA1EQ15878 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.58■□□□□ 0.4
CACNA1EQ15878 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA1EQ15878 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CACNA1EQ15878 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CACNA1EQ15878 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNA1EQ15878 AC009947.1-201ENST00000444350 727 ntBASIC17.58■□□□□ 0.4
CACNA1EQ15878 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.58■□□□□ 0.4
CACNA1EQ15878 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNA1EQ15878 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
CACNA1EQ15878 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNA1EQ15878 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA1EQ15878 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA1EQ15878 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA1EQ15878 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA1EQ15878 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA1EQ15878 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA1EQ15878 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNA1EQ15878 RNA5SP416-201ENST00000516838 111 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms