Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
DSC1Q08554 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
DSC1Q08554 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 AC243591.1-201ENST00000452967 1364 ntBASIC19.23■□□□□ 0.67
DSC1Q08554 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.23■□□□□ 0.67
DSC1Q08554 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.23■□□□□ 0.67
DSC1Q08554 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 AC007967.3-201ENST00000434308 558 ntBASIC19.23■□□□□ 0.67
DSC1Q08554 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.23■□□□□ 0.67
DSC1Q08554 SART3-203ENST00000546611 1184 ntBASIC19.23■□□□□ 0.67
DSC1Q08554 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.23■□□□□ 0.67
DSC1Q08554 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.23■□□□□ 0.67
DSC1Q08554 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.23■□□□□ 0.67
DSC1Q08554 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DSC1Q08554 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DSC1Q08554 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
DSC1Q08554 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
DSC1Q08554 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DSC1Q08554 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DSC1Q08554 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.22■□□□□ 0.67
DSC1Q08554 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DSC1Q08554 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DSC1Q08554 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
DSC1Q08554 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 AC096633.1-201ENST00000422446 749 ntBASIC19.22■□□□□ 0.67
DSC1Q08554 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.22■□□□□ 0.67
DSC1Q08554 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DSC1Q08554 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.22■□□□□ 0.67
DSC1Q08554 SLC25A1P1-201ENST00000528351 927 ntBASIC19.22■□□□□ 0.67
DSC1Q08554 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.22■□□□□ 0.67
DSC1Q08554 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.22■□□□□ 0.67
DSC1Q08554 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.22■□□□□ 0.67
DSC1Q08554 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.22■□□□□ 0.67
DSC1Q08554 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DSC1Q08554 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DSC1Q08554 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DSC1Q08554 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.22■□□□□ 0.67
DSC1Q08554 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
DSC1Q08554 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DSC1Q08554 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.21■□□□□ 0.67
DSC1Q08554 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.21■□□□□ 0.67
DSC1Q08554 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DSC1Q08554 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DSC1Q08554 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
DSC1Q08554 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.21■□□□□ 0.67
DSC1Q08554 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.21■□□□□ 0.67
DSC1Q08554 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DSC1Q08554 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
DSC1Q08554 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.21■□□□□ 0.67
DSC1Q08554 FAM220CP-201ENST00000395253 831 ntBASIC19.21■□□□□ 0.67
DSC1Q08554 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DSC1Q08554 DUTP2-201ENST00000519164 463 ntBASIC19.21■□□□□ 0.67
DSC1Q08554 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.21■□□□□ 0.67
DSC1Q08554 AC021087.4-201ENST00000563761 564 ntBASIC19.21■□□□□ 0.67
DSC1Q08554 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.21■□□□□ 0.67
DSC1Q08554 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
DSC1Q08554 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
DSC1Q08554 AF228730.7-201ENST00000641842 219 ntBASIC19.21■□□□□ 0.67
DSC1Q08554 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DSC1Q08554 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DSC1Q08554 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DSC1Q08554 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DSC1Q08554 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.21■□□□□ 0.67
DSC1Q08554 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DSC1Q08554 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DSC1Q08554 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DSC1Q08554 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.2■□□□□ 0.66
DSC1Q08554 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DSC1Q08554 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DSC1Q08554 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DSC1Q08554 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DSC1Q08554 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
DSC1Q08554 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DSC1Q08554 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.2■□□□□ 0.66
DSC1Q08554 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms