Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDH1Q08174 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH1Q08174 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH1Q08174 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PCDH1Q08174 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDH1Q08174 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH1Q08174 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDH1Q08174 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH1Q08174 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
PCDH1Q08174 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH1Q08174 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
PCDH1Q08174 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDH1Q08174 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH1Q08174 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDH1Q08174 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDH1Q08174 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDH1Q08174 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDH1Q08174 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.52■□□□□ 0.4
PCDH1Q08174 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH1Q08174 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDH1Q08174 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH1Q08174 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH1Q08174 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDH1Q08174 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH1Q08174 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDH1Q08174 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDH1Q08174 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 AC068880.1-201ENST00000507289 2297 ntBASIC17.51■□□□□ 0.39
PCDH1Q08174 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH1Q08174 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH1Q08174 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH1Q08174 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDH1Q08174 STARP1-201ENST00000397973 869 ntBASIC17.51■□□□□ 0.39
PCDH1Q08174 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH1Q08174 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 LIN28AP1-201ENST00000429574 405 ntBASIC17.51■□□□□ 0.39
PCDH1Q08174 RASA4DP-201ENST00000460726 1199 ntBASIC17.51■□□□□ 0.39
PCDH1Q08174 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH1Q08174 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDH1Q08174 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDH1Q08174 AL441883.1-201ENST00000566170 1045 ntBASIC17.51■□□□□ 0.39
PCDH1Q08174 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDH1Q08174 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH1Q08174 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDH1Q08174 AC140113.3-201ENST00000605663 199 ntBASIC17.51■□□□□ 0.39
PCDH1Q08174 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH1Q08174 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH1Q08174 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH1Q08174 AC005332.8-201ENST00000622750 2735 ntBASIC17.51■□□□□ 0.39
PCDH1Q08174 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH1Q08174 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDH1Q08174 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
PCDH1Q08174 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH1Q08174 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH1Q08174 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
PCDH1Q08174 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 LINC00167-201ENST00000530583 1419 ntBASIC17.5■□□□□ 0.39
PCDH1Q08174 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDH1Q08174 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
PCDH1Q08174 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH1Q08174 AC211429.1-201ENST00000415277 523 ntBASIC17.5■□□□□ 0.39
PCDH1Q08174 AL137013.1-201ENST00000432946 1228 ntBASIC17.5■□□□□ 0.39
PCDH1Q08174 HLA-F-220ENST00000434407 884 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms