Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP46P62068 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
USP46P62068 LINC00602-201ENST00000629776 2065 ntBASIC19.07■□□□□ 0.64
USP46P62068 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP46P62068 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.07■□□□□ 0.64
USP46P62068 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP46P62068 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP46P62068 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.07■□□□□ 0.64
USP46P62068 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP46P62068 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP46P62068 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP46P62068 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.06■□□□□ 0.64
USP46P62068 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP46P62068 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
USP46P62068 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.06■□□□□ 0.64
USP46P62068 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP46P62068 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.06■□□□□ 0.64
USP46P62068 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP46P62068 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP46P62068 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP46P62068 FOSL1P1-201ENST00000511041 816 ntBASIC19.06■□□□□ 0.64
USP46P62068 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP46P62068 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.06■□□□□ 0.64
USP46P62068 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.06■□□□□ 0.64
USP46P62068 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
USP46P62068 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.06■□□□□ 0.64
USP46P62068 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
USP46P62068 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP46P62068 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP46P62068 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP46P62068 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP46P62068 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP46P62068 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP46P62068 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.05■□□□□ 0.64
USP46P62068 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.05■□□□□ 0.64
USP46P62068 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.05■□□□□ 0.64
USP46P62068 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
USP46P62068 IGHV3-47-201ENST00000425060 335 ntBASIC19.05■□□□□ 0.64
USP46P62068 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.05■□□□□ 0.64
USP46P62068 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.05■□□□□ 0.64
USP46P62068 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.05■□□□□ 0.64
USP46P62068 AL732292.2-201ENST00000609649 430 ntBASIC19.05■□□□□ 0.64
USP46P62068 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.05■□□□□ 0.64
USP46P62068 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
USP46P62068 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.05■□□□□ 0.64
USP46P62068 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP46P62068 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP46P62068 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP46P62068 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.05■□□□□ 0.64
USP46P62068 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.05■□□□□ 0.64
USP46P62068 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.05■□□□□ 0.64
USP46P62068 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.04■□□□□ 0.64
USP46P62068 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.04■□□□□ 0.64
USP46P62068 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.04■□□□□ 0.64
USP46P62068 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 ESPNP-201ENST00000270691 2015 ntBASIC19.04■□□□□ 0.64
USP46P62068 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
USP46P62068 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
USP46P62068 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 KRT17P6-201ENST00000453795 1220 ntBASIC19.04■□□□□ 0.64
USP46P62068 AC104819.1-201ENST00000504587 486 ntBASIC19.04■□□□□ 0.64
USP46P62068 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.04■□□□□ 0.64
USP46P62068 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
USP46P62068 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
USP46P62068 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.04■□□□□ 0.64
USP46P62068 AC008687.5-201ENST00000593746 558 ntBASIC19.04■□□□□ 0.64
USP46P62068 AC012183.1-201ENST00000625197 499 ntBASIC19.04■□□□□ 0.64
USP46P62068 AC007613.1-201ENST00000572811 2597 ntBASIC19.04■□□□□ 0.64
USP46P62068 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.04■□□□□ 0.64
USP46P62068 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP46P62068 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP46P62068 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.03■□□□□ 0.64
USP46P62068 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.03■□□□□ 0.64
USP46P62068 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP46P62068 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms