Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN6P56747 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN6P56747 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 PMS2P2-201ENST00000425039 1128 ntBASIC17.39■□□□□ 0.37
CLDN6P56747 GPX1P2-201ENST00000429271 606 ntBASIC17.39■□□□□ 0.37
CLDN6P56747 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN6P56747 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.39■□□□□ 0.37
CLDN6P56747 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.39■□□□□ 0.37
CLDN6P56747 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CLDN6P56747 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN6P56747 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN6P56747 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLDN6P56747 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.39■□□□□ 0.37
CLDN6P56747 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN6P56747 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.39■□□□□ 0.37
CLDN6P56747 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLDN6P56747 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLDN6P56747 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 AP005117.1-201ENST00000584346 1413 ntBASIC17.38■□□□□ 0.37
CLDN6P56747 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN6P56747 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN6P56747 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.38■□□□□ 0.37
CLDN6P56747 AC007967.2-201ENST00000432613 625 ntBASIC17.38■□□□□ 0.37
CLDN6P56747 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN6P56747 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN6P56747 AC112482.1-201ENST00000492080 688 ntBASIC17.38■□□□□ 0.37
CLDN6P56747 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN6P56747 OR7E14P-202ENST00000530490 1290 ntBASIC17.38■□□□□ 0.37
CLDN6P56747 AC025062.2-201ENST00000605477 670 ntBASIC17.38■□□□□ 0.37
CLDN6P56747 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN6P56747 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
CLDN6P56747 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLDN6P56747 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN6P56747 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN6P56747 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CLDN6P56747 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
CLDN6P56747 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLDN6P56747 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN6P56747 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN6P56747 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN6P56747 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLDN6P56747 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CLDN6P56747 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN6P56747 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN6P56747 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN6P56747 RPS2P28-201ENST00000314255 741 ntBASIC17.37■□□□□ 0.37
CLDN6P56747 YBX2P1-201ENST00000394192 760 ntBASIC17.37■□□□□ 0.37
CLDN6P56747 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN6P56747 KRT18P3-201ENST00000451602 1288 ntBASIC17.37■□□□□ 0.37
CLDN6P56747 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN6P56747 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN6P56747 AP001160.2-201ENST00000596071 487 ntBASIC17.37■□□□□ 0.37
CLDN6P56747 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN6P56747 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN6P56747 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN6P56747 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN6P56747 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN6P56747 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN6P56747 AP002414.3-201ENST00000589352 1468 ntBASIC17.37■□□□□ 0.37
CLDN6P56747 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN6P56747 LINC00602-201ENST00000629776 2065 ntBASIC17.36■□□□□ 0.37
CLDN6P56747 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN6P56747 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN6P56747 HLA-J-201ENST00000462773 1622 ntBASIC17.36■□□□□ 0.37
CLDN6P56747 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN6P56747 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN6P56747 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN6P56747 AL049812.1-201ENST00000432563 2267 ntBASIC17.36■□□□□ 0.37
CLDN6P56747 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN6P56747 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN6P56747 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms