Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.85■□□□□ 0.77
NCKAP1LP55160 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.85■□□□□ 0.77
NCKAP1LP55160 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NCKAP1LP55160 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.85■□□□□ 0.77
NCKAP1LP55160 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.85■□□□□ 0.77
NCKAP1LP55160 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 UPK3BP1-201ENST00000428678 509 ntBASIC19.85■□□□□ 0.77
NCKAP1LP55160 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 GUSBP12-201ENST00000513727 720 ntBASIC19.85■□□□□ 0.77
NCKAP1LP55160 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.85■□□□□ 0.77
NCKAP1LP55160 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.85■□□□□ 0.77
NCKAP1LP55160 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 AL592071.1-201ENST00000611956 408 ntBASIC19.85■□□□□ 0.77
NCKAP1LP55160 NPAP1P7-201ENST00000613027 823 ntBASIC19.85■□□□□ 0.77
NCKAP1LP55160 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.85■□□□□ 0.77
NCKAP1LP55160 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NCKAP1LP55160 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.85■□□□□ 0.77
NCKAP1LP55160 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCKAP1LP55160 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 AC068472.1-201ENST00000474589 881 ntBASIC19.84■□□□□ 0.77
NCKAP1LP55160 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 FLJ13224-201ENST00000313737 1514 ntBASIC19.84■□□□□ 0.77
NCKAP1LP55160 AL390961.4-201ENST00000623958 2535 ntBASIC19.84■□□□□ 0.77
NCKAP1LP55160 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKAP1LP55160 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.84■□□□□ 0.77
NCKAP1LP55160 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NCKAP1LP55160 AC138028.4-201ENST00000564984 1845 ntBASIC19.83■□□□□ 0.77
NCKAP1LP55160 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCKAP1LP55160 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NCKAP1LP55160 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCKAP1LP55160 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCKAP1LP55160 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCKAP1LP55160 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCKAP1LP55160 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCKAP1LP55160 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NCKAP1LP55160 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.83■□□□□ 0.77
NCKAP1LP55160 ATP5G2P1-201ENST00000433580 426 ntBASIC19.83■□□□□ 0.77
NCKAP1LP55160 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.83■□□□□ 0.77
NCKAP1LP55160 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.83■□□□□ 0.77
NCKAP1LP55160 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NCKAP1LP55160 AL353801.3-201ENST00000609898 542 ntBASIC19.83■□□□□ 0.77
NCKAP1LP55160 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.83■□□□□ 0.77
NCKAP1LP55160 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
NCKAP1LP55160 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NCKAP1LP55160 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCKAP1LP55160 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
NCKAP1LP55160 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
NCKAP1LP55160 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
NCKAP1LP55160 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NCKAP1LP55160 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.83■□□□□ 0.76
NCKAP1LP55160 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NCKAP1LP55160 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.83■□□□□ 0.76
NCKAP1LP55160 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.83■□□□□ 0.76
NCKAP1LP55160 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NCKAP1LP55160 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
NCKAP1LP55160 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKAP1LP55160 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.82■□□□□ 0.76
NCKAP1LP55160 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NCKAP1LP55160 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NCKAP1LP55160 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NCKAP1LP55160 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms