Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
PSMD4P55036 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PSMD4P55036 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 AC117947.1-201ENST00000427448 529 ntBASIC16.92■□□□□ 0.3
PSMD4P55036 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.92■□□□□ 0.3
PSMD4P55036 PVRIG2P-201ENST00000435460 978 ntBASIC16.92■□□□□ 0.3
PSMD4P55036 AC092647.4-201ENST00000457211 535 ntBASIC16.92■□□□□ 0.3
PSMD4P55036 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.92■□□□□ 0.3
PSMD4P55036 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.92■□□□□ 0.3
PSMD4P55036 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.92■□□□□ 0.3
PSMD4P55036 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.92■□□□□ 0.3
PSMD4P55036 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.92■□□□□ 0.3
PSMD4P55036 AC011558.1-201ENST00000623459 338 ntBASIC16.92■□□□□ 0.3
PSMD4P55036 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.92■□□□□ 0.3
PSMD4P55036 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.92■□□□□ 0.3
PSMD4P55036 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.92■□□□□ 0.3
PSMD4P55036 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PSMD4P55036 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PSMD4P55036 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PSMD4P55036 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PSMD4P55036 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PSMD4P55036 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.91■□□□□ 0.3
PSMD4P55036 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PSMD4P55036 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PSMD4P55036 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PSMD4P55036 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PSMD4P55036 AC093677.2-201ENST00000600169 1863 ntBASIC16.91■□□□□ 0.3
PSMD4P55036 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PSMD4P55036 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PSMD4P55036 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PSMD4P55036 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PSMD4P55036 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PSMD4P55036 STARP1-201ENST00000397973 869 ntBASIC16.91■□□□□ 0.3
PSMD4P55036 FAM8A6P-201ENST00000407496 1135 ntBASIC16.91■□□□□ 0.3
PSMD4P55036 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.91■□□□□ 0.3
PSMD4P55036 TSPY5P-201ENST00000426936 936 ntBASIC16.91■□□□□ 0.3
PSMD4P55036 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.91■□□□□ 0.3
PSMD4P55036 RASA4DP-201ENST00000460726 1199 ntBASIC16.91■□□□□ 0.3
PSMD4P55036 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
PSMD4P55036 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PSMD4P55036 AL441883.1-201ENST00000566170 1045 ntBASIC16.91■□□□□ 0.3
PSMD4P55036 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.91■□□□□ 0.3
PSMD4P55036 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.91■□□□□ 0.3
PSMD4P55036 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.91■□□□□ 0.3
PSMD4P55036 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PSMD4P55036 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.91■□□□□ 0.3
PSMD4P55036 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PSMD4P55036 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PSMD4P55036 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PSMD4P55036 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.91■□□□□ 0.3
PSMD4P55036 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.91■□□□□ 0.3
PSMD4P55036 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PSMD4P55036 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.9■□□□□ 0.3
PSMD4P55036 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.9■□□□□ 0.3
PSMD4P55036 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
PSMD4P55036 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PSMD4P55036 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.9■□□□□ 0.3
PSMD4P55036 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.9■□□□□ 0.3
PSMD4P55036 AL157888.1-201ENST00000631930 593 ntBASIC16.9■□□□□ 0.3
PSMD4P55036 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.9■□□□□ 0.3
PSMD4P55036 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PSMD4P55036 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.9■□□□□ 0.3
PSMD4P55036 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.9■□□□□ 0.3
PSMD4P55036 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PSMD4P55036 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PSMD4P55036 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms