Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.95■□□□□ 0.79
ACLYP53396 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.95■□□□□ 0.78
ACLYP53396 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ACLYP53396 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.95■□□□□ 0.78
ACLYP53396 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.95■□□□□ 0.78
ACLYP53396 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ACLYP53396 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACLYP53396 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACLYP53396 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACLYP53396 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACLYP53396 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACLYP53396 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.95■□□□□ 0.78
ACLYP53396 AC007967.3-201ENST00000434308 558 ntBASIC19.95■□□□□ 0.78
ACLYP53396 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.95■□□□□ 0.78
ACLYP53396 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACLYP53396 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.95■□□□□ 0.78
ACLYP53396 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
ACLYP53396 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ACLYP53396 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACLYP53396 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ACLYP53396 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACLYP53396 AC079776.2-201ENST00000641154 1609 ntBASIC19.94■□□□□ 0.78
ACLYP53396 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ACLYP53396 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACLYP53396 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.94■□□□□ 0.78
ACLYP53396 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ACLYP53396 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACLYP53396 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.94■□□□□ 0.78
ACLYP53396 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACLYP53396 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACLYP53396 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.94■□□□□ 0.78
ACLYP53396 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.94■□□□□ 0.78
ACLYP53396 DNAJB3-202ENST00000449667 1266 ntBASIC19.94■□□□□ 0.78
ACLYP53396 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.94■□□□□ 0.78
ACLYP53396 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.94■□□□□ 0.78
ACLYP53396 MTDHP5-201ENST00000598980 586 ntBASIC19.94■□□□□ 0.78
ACLYP53396 LINC02084-201ENST00000606069 1096 ntBASIC19.94■□□□□ 0.78
ACLYP53396 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.94■□□□□ 0.78
ACLYP53396 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACLYP53396 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ACLYP53396 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ACLYP53396 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ACLYP53396 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.94■□□□□ 0.78
ACLYP53396 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACLYP53396 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACLYP53396 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
ACLYP53396 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.94■□□□□ 0.78
ACLYP53396 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACLYP53396 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ACLYP53396 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ACLYP53396 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ACLYP53396 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.93■□□□□ 0.78
ACLYP53396 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
ACLYP53396 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACLYP53396 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACLYP53396 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ACLYP53396 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.93■□□□□ 0.78
ACLYP53396 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.93■□□□□ 0.78
ACLYP53396 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.93■□□□□ 0.78
ACLYP53396 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.93■□□□□ 0.78
ACLYP53396 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACLYP53396 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACLYP53396 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACLYP53396 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.93■□□□□ 0.78
ACLYP53396 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ACLYP53396 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACLYP53396 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ACLYP53396 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ACLYP53396 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.93■□□□□ 0.78
ACLYP53396 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.93■□□□□ 0.78
ACLYP53396 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.93■□□□□ 0.78
ACLYP53396 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ACLYP53396 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.93■□□□□ 0.78
ACLYP53396 AL022326.1-202ENST00000641533 845 ntBASIC19.93■□□□□ 0.78
ACLYP53396 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ACLYP53396 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACLYP53396 AC097374.2-201ENST00000618617 1306 ntBASIC19.93■□□□□ 0.78
ACLYP53396 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ACLYP53396 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACLYP53396 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACLYP53396 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ACLYP53396 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACLYP53396 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ACLYP53396 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.92■□□□□ 0.78
ACLYP53396 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.92■□□□□ 0.78
ACLYP53396 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ACLYP53396 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ACLYP53396 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ACLYP53396 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACLYP53396 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.92■□□□□ 0.78
ACLYP53396 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ACLYP53396 KRT18P27-201ENST00000427733 1299 ntBASIC19.92■□□□□ 0.78
ACLYP53396 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.92■□□□□ 0.78
ACLYP53396 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.92■□□□□ 0.78
ACLYP53396 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.92■□□□□ 0.78
ACLYP53396 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
ACLYP53396 MIR1199-201ENST00000621445 119 ntBASIC19.92■□□□□ 0.78
ACLYP53396 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ACLYP53396 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.92■□□□□ 0.78
ACLYP53396 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms